Evidence map›Paper›PMID 24674627›Full record

ArticleDNA repair2014

Overexpression of DNA ligase III in mitochondria protects cells against oxidative stress and improves mitochondrial DNA base excision repair.

Mansour Akbari, Guido Keijzers, Scott Maynard, Morten Scheibye-Knudsen, Claus Desler, Ian D Hickson, Vilhelm A Bohr

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Fueling genome maintenance: On the versatile roles of NADThe Journal of biological chemistry · 2022
    Review
  7. Dynamic features of human mitochondrial DNA maintenance and transcription.Frontiers in cell and developmental biology · 2022
    Review
  8. Article
  9. Article
  10. Review
  11. Mitophagy and DNA damage signaling in human aging.Mechanisms of ageing and development · 2020
    Review
  12. Review
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. DNA Damage, DNA Repair, Aging, and Neurodegeneration.Cold Spring Harbor perspectives in medicine · 2015
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Mansour AkbariCenter for Healthy Aging, SUND, University of Copenhagen, Denmark.
Guido KeijzersCenter for Healthy Aging, SUND, University of Copenhagen, Denmark.
Scott MaynardCenter for Healthy Aging, SUND, University of Copenhagen, Denmark.
Morten Scheibye-KnudsenLaboratory of Molecular Gerontology, National Institute on Aging, 251 Bayview Boulevard, Baltimore, USA.
Claus DeslerCenter for Healthy Aging, SUND, University of Copenhagen, Denmark.
Ian D HicksonCenter for Healthy Aging, SUND, University of Copenhagen, Denmark.
Vilhelm A BohrLaboratory of Molecular Gerontology, National Institute on Aging, 251 Bayview Boulevard, Baltimore, USA; Center for Healthy Aging, SUND, University of Copenhagen, Denmark. Electronic address: vbohr@nih.gov.
University of Copenhagen · DKNational Institute on Aging · US

Funding

DNA repair dysfunction in neurodegeneration and Alzheimer's DiseaseZIAAG000723 · NIA · NATIONAL INSTITUTE ON AGING · PI BROSH, ROBERT · 2009 to 2025
$9.5M
Mitochondrial DNA Repair Processes In Oxidative Stress And AgingZIAAG000733 · NIA · NATIONAL INSTITUTE ON AGING · PI FERRUCCI, LUIGI · 2009 to 2022
$9.2M
Oxidative DNA Damage And Its ProcessingZIAAG000727 · NIA · NATIONAL INSTITUTE ON AGING · PI FERRUCCI, LUIGI · 2009 to 2022
$8.4M
GROWTH ARREST AND DNA DAMAGE INDUCIBLE GENE GADD153--REGULATION BY DNA DAMAGEZ01AG000723 · NIA · NATIONAL INSTITUTE ON AGING · PI BOHR, VILHELM · 1992 to 2008
$310k
Intramural NIH HHS Z01 AG000723Intramural NIH HHS ZIA AG000733
6 · The paper itself

Abstract

Base excision repair (BER) is the most prominent DNA repair pathway in human mitochondria. BER also results in a temporary generation of AP-sites, single-strand breaks and nucleotide gaps. Thus, incomplete BER can result in the generation of DNA repair intermediates that can disrupt mitochondrial DNA replication and transcription and generate mutations. We carried out BER analysis in highly purified mitochondrial extracts from human cell lines U2OS and HeLa, and mouse brain using a circular DNA substrate containing a lesion at a specific position. We found that DNA ligation is significantly slower than the preceding mitochondrial BER steps. Overexpression of DNA ligase III in mitochondria improved the rate of overall BER, increased cell survival after menadione induced oxidative stress and reduced autophagy following the inhibition of the mitochondrial electron transport chain complex I by rotenone. Our results suggest that the amount of DNA ligase III in mitochondria may be critical for cell survival following prolonged oxidative stress, and demonstrate a functional link between mitochondrial DNA damage and repair, cell survival upon oxidative stress, and removal of dysfunctional mitochondria by autophagy.

Indexed as

DNA RepairAnimalsAutophagyBrainCell Line, TumorCell SurvivalDNA Ligase ATPDNA LigasesDNA, MitochondrialElectron Transport Complex IHeLa CellsHumansMiceMitochondriaOxidative StressPoly-ADP-Ribose Binding ProteinsDNA Ligase ATPDNA ligase III alpha protein, XenopusDNA LigasesDNA, MitochondrialElectron Transport Complex ILIG3 protein, humanLig3 protein, mousePoly-ADP-Ribose Binding ProteinsRotenoneVitamin K 3Xenopus ProteinsAutophagyCell survivalMitochondrial DNA repair intermediatesOxidative stress

Identifiers

PMID24674627
PMCPMC5156482
OpenAlexW2148732493

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.