Evidence map›Paper›PMID 24671946›Full record

ArticleOpen biology2014

Molecular basis for the fold organization and sarcomeric targeting of the muscle atrogin MuRF1.

Barbara Franke, Alexander Gasch, Dayté Rodriguez, Mohamed Chami, Muzamil M Khan, Rüdiger Rudolf, Jaclyn Bibby, Akira Hanashima, Julijus Bogomolovas, Eleonore von Castelmur and 4 more

Open access · goldAbstract read
In one paragraph

Article in Open biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. MuRF1/TRIM63, Master Regulator of Muscle Mass.International journal of molecular sciences · 2020
    Review
  5. Emerging Strategies Targeting Catabolic Muscle Stress Relief.International journal of molecular sciences · 2020
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 4 countries.

Barbara FrankeInstitute of Integrative Biology, University of Liverpool, Biosciences Building, Crown Street, Liverpool L69 7ZB, UK.
Alexander Gasch
Dayté Rodriguez
Mohamed Chami
Muzamil M Khan
Rüdiger Rudolf
Jaclyn Bibby
Akira Hanashima
Julijus Bogomolovas
Eleonore von Castelmur
Daniel J Rigden
Isabel Uson
Siegfried Labeit
Olga Mayans
University of Liverpool · GBHeidelberg University · DEInstitut de Biologia Molecular de Barcelona · ESKarlsruhe Institute of Technology · DEUniversity Medical Centre Mannheim · DEUniversity of Basel · CH

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

MuRF1 is an E3 ubiquitin ligase central to muscle catabolism. It belongs to the TRIM protein family characterized by a tripartite fold of RING, B-box and coiled-coil (CC) motifs, followed by variable C-terminal domains. The CC motif is hypothesized to be responsible for domain organization in the fold as well as for high-order assembly into functional entities. But data on CC from this family that can clarify the structural significance of this motif are scarce. We have characterized the helical region from MuRF1 and show that, contrary to expectations, its CC domain assembles unproductively, being the B2- and COS-boxes in the fold (respectively flanking the CC) that promote a native quaternary structure. In particular, the C-terminal COS-box seemingly forms an α-hairpin that packs against the CC, influencing its dimerization. This shows that a C-terminal variable domain can be tightly integrated within the conserved TRIM fold to modulate its structure and function. Furthermore, data from transfected muscle show that in MuRF1 the COS-box mediates the in vivo targeting of sarcoskeletal structures and points to the pharmacological relevance of the COS domain for treating MuRF1-mediated muscle atrophy.

Indexed as

Models, MolecularAmino Acid SequenceAnimalsCrystallography, X-RayDimerizationHumansMolecular Sequence DataMuscle ProteinsMuscular AtrophyProtein FoldingProtein Structure, TertiaryRecombinant ProteinsSarcomeresSequence AlignmentTripartite Motif ProteinsUbiquitin-Protein LigasesMuscle ProteinsRecombinant ProteinsTRIM63 protein, humanTripartite Motif ProteinsUbiquitin-Protein Ligasesab initio modellingcoiled-coilCOS-boxelectron microscopyRBCC/TRIM foldX-ray crystallography

Identifiers

PMID24671946
PMCPMC3971405
OpenAlexW2147008884

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.