Evidence map›Paper›PMID 24671755›Full record

ArticleMicrobial ecology2014

Characterization of chasmoendolithic community in Miers Valley, McMurdo Dry Valleys, Antarctica.

Charmaine C M Yung, Yuki Chan, Donnabella C Lacap, Sergio Pérez-Ortega, Asuncion de Los Rios-Murillo, Charles K Lee, S Craig Cary, Stephen B Pointing

Abstract read
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In one paragraph

Article in Microbial ecology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
5.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 63 citations in OpenAlex.

  1. Article
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  6. Ecological Characteristics of Antarctic Fungi.Doklady biological sciences : proceedings of the Academy of Sciences of the USSR, Biological sciences sections · 2023
    Review
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  12. Phylogeny and Ecology ofFrontiers in microbiology · 2022
    Article
  13. Article
  14. Journal of fungi (Basel, Switzerland) · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Charmaine C M YungNicholas School of the Environment, Duke University, Durham, NC, 27708, USA.
Yuki Chan
Donnabella C Lacap
Sergio Pérez-Ortega
Asuncion de Los Rios-Murillo
Charles K Lee
S Craig Cary
Stephen B Pointing
Auckland University of Technology · NZAntarctica New Zealand · NZMuseo Nacional de Ciencias Naturales · ESDuke University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Antarctic Dry Valleys are unable to support higher plant and animal life and so microbial communities dominate biotic ecosystem processes. Soil communities are well characterized, but rocky surfaces have also emerged as a significant microbial habitat. Here, we identify extensive colonization of weathered granite on a landscape scale by chasmoendolithic microbial communities. A transect across north-facing and south-facing slopes plus valley floor moraines revealed 30-100 % of available substrate was colonized up to an altitude of 800 m. Communities were assessed at a multidomain level and were clearly distinct from those in surrounding soils and other rock-inhabiting cryptoendolithic and hypolithic communities. All colonized rocks were dominated by the cyanobacterial genus Leptolyngbya (Oscillatoriales), with heterotrophic bacteria, archaea, algae, and fungi also identified. Striking patterns in community distribution were evident with regard to microclimate as determined by aspect. Notably, a shift in cyanobacterial assemblages from Chroococcidiopsis-like phylotypes (Pleurocapsales) on colder-drier slopes, to Synechococcus-like phylotypes (Chroococcales) on warmer-wetter slopes. Greater relative abundance of known desiccation-tolerant bacterial taxa occurred on colder-drier slopes. Archaeal phylotypes indicated halotolerant taxa and also taxa possibly derived from nearby volcanic sources. Among the eukaryotes, the lichen photobiont Trebouxia (Chlorophyta) was ubiquitous, but known lichen-forming fungi were not recovered. Instead, fungal assemblages were dominated by ascomycetous yeasts. We conclude that chasmoendoliths likely constitute a significant geobiological phenomenon at lower elevations in granite-dominated Antarctic Dry Valley systems.

Indexed as

BiodiversityEcosystemSoil MicrobiologyAntarctic RegionsArchaeaBacteriaCyanobacteriaFungiLichensMicrobial ConsortiaMicroclimatePhylogenySequence Analysis, DNASilicon DioxidegraniteSilicon Dioxide

Identifiers

PMID24671755
OpenAlexW2072351760

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.