Evidence map›Paper›PMID 24671087›Full record

ArticleThe ISME journal2014

Deciphering microbial landscapes of fish eggs to mitigate emerging diseases.

Yiying Liu, Irene de Bruijn, Allison L H Jack, Keith Drynan, Albert H van den Berg, Even Thoen, Vladimir Sandoval-Sierra, Ida Skaar, Pieter van West, Javier Diéguez-Uribeondo and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 89 citations in OpenAlex.

  1. Article
  2. Article
  3. DRIVERS OF VARIATION OF THE ZEBRAFISH EGG MICROBIOME.bioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Mixed-Mode Bacterial TransmissionFrontiers in microbiology · 2022
    Article
  18. Early life stress causes persistent impacts on the microbiome of Atlantic salmon.Comparative biochemistry and physiology. Part D, Genomics & proteomics · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 6 countries.

Yiying Liu1] Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands [2] Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands.
Irene de Bruijn1] Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands [2] Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands.
Allison L H Jack1] Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands [2] Prescott College, Environmental Studies Program, Prescott, AZ, USA.
Keith DrynanLandcatch, Hendrix Genetics B.V., Argyll, UK.
Albert H van den BergAberdeen Oomycete Laboratory, Institute of Medical Sciences, University of Aberdeen, Aberdeen, UK.
Even Thoen1] Norwegian Veterinary Institute, Oslo, Norway [2] Norwegian School of Veterinary Science, Oslo, Norway.
Vladimir Sandoval-SierraReal Jardín Botánico CSIC, Madrid, Spain.
Ida SkaarNorwegian Veterinary Institute, Oslo, Norway.
Pieter van WestAberdeen Oomycete Laboratory, Institute of Medical Sciences, University of Aberdeen, Aberdeen, UK.
Javier Diéguez-UribeondoReal Jardín Botánico CSIC, Madrid, Spain.
Menno van der VoortLaboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands.
Rodrigo MendesLaboratory of Environmental Microbiology, Embrapa Environment, Jaguariuna, Brazil.
Mark MazzolaUSDA-ARS, Wenatchee, WA, USA.
Jos M Raaijmakers1] Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands [2] Laboratory of Phytopathology, Wageningen University, Wageningen, The Netherlands.
Wageningen University & Research · NLNetherlands Institute of Ecology · NLNorwegian Veterinary Institute · NOReal Jardín Botánico · ESUniversity of Aberdeen · GBBrazilian Agricultural Research Corporation · BRLandcatch (United Kingdom) · GB

Funding

Biotechnology and Biological Sciences Research Council BB/G012075/1
6 · The paper itself

Abstract

Animals and plants are increasingly suffering from diseases caused by fungi and oomycetes. These emerging pathogens are now recognized as a global threat to biodiversity and food security. Among oomycetes, Saprolegnia species cause significant declines in fish and amphibian populations. Fish eggs have an immature adaptive immune system and depend on nonspecific innate defences to ward off pathogens. Here, meta-taxonomic analyses revealed that Atlantic salmon eggs are home to diverse fungal, oomycete and bacterial communities. Although virulent Saprolegnia isolates were found in all salmon egg samples, a low incidence of Saprolegniosis was strongly correlated with a high richness and abundance of specific commensal Actinobacteria, with the genus Frondihabitans (Microbacteriaceae) effectively inhibiting attachment of Saprolegniato salmon eggs. These results highlight that fundamental insights into microbial landscapes of fish eggs may provide new sustainable means to mitigate emerging diseases.

Indexed as

SaprolegniaAnimalsCommunicable Diseases, EmergingFish DiseasesMicrobiotaOomycetesOvumSalmo salar

Identifiers

PMID24671087
PMCPMC4184010
OpenAlexW1986196795

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.