Evidence map›Paper›PMID 24670900›Full record

ArticlePloS one2014

AspC-mediated aspartate metabolism coordinates the Escherichia coli cell cycle.

Feng Liu, Qimuge, Jianfeng Hao, Huijuan Yan, Trond Bach, Lifei Fan, Morigen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Systems metabolic engineering for hydroxytyrosol production inApplied and environmental microbiology · 2026
    Article
  3. Aspartate aminotransferase is required forInfection and immunity · 2026
    Article
  4. Aspartate aminotransferase is required forbioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Characterizing Common Factors Affecting Replication Initiation During HInternational journal of molecular sciences · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Biosynthesis of Amino Acids inMicroorganisms · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Metabolism Shapes the Cell.Journal of bacteriology · 2017
    Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Feng LiuSchool of Life Sciences, Inner Mongolia University, Hohhot, China.
QimugeSchool of Life Sciences, Inner Mongolia University, Hohhot, China.
Jianfeng HaoSchool of Life Sciences, Inner Mongolia University, Hohhot, China.
Huijuan YanSchool of Life Sciences, Inner Mongolia University, Hohhot, China.
Trond BachDepartment of Pharmacology, Faculty of Medicine, University of Oslo and Oslo University Hospital, Oslo, Norway.
Lifei FanSchool of Life Sciences, Inner Mongolia University, Hohhot, China.
MorigenSchool of Life Sciences, Inner Mongolia University, Hohhot, China.
Inner Mongolia University · CNUniversity of Oslo · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe fast-growing bacterial cell cycle consists of at least two independent cycles of chromosome replication and cell division. To ensure proper cell cycles and viability, chromosome replication and cell division must be coordinated. It has been suggested that metabolism could affect the Escherichia coli cell cycle, but the idea is still lacking solid evidences. METHODOLOGY/PRINCIPLE

findingsWe found that absence of AspC, an aminotransferase that catalyzes synthesis of aspartate, led to generation of small cells with less origins and slow growth. In contrast, excess AspC was found to exert the opposite effect. Further analysis showed that AspC-mediated aspartate metabolism had a specific effect in the cell cycle, as only extra aspartate of the 20 amino acids triggered production of bigger cells with more origins per cell and faster growth. The amount of DnaA protein per cell was found to be changed in response to the availability of AspC. Depletion of (p)ppGpp by ΔrelAΔspoT led to a slight delay in initiation of replication, but did not change the replication pattern found in the ΔaspC mutant. CONCLUSION/SIGNIFICANCES: The results suggest that AspC-mediated metabolism of aspartate coordinates the E. coli cell cycle through altering the amount of the initiator protein DnaA per cell and the division signal UDP-glucose. Furthermore, AspC sequence conservation suggests similar functions in other organisms.

Indexed as

Cell CycleAspartic AcidBacterial ProteinsConserved SequenceDNA-Binding ProteinsDNA ReplicationEscherichia coliGene DeletionGenes, BacterialGuanosine TetraphosphateModels, BiologicalMolecular Sequence DataPhenotypeReplication OriginTransaminasesAspartic AcidBacterial ProteinsDnaA protein, BacteriaDNA-Binding ProteinsGuanosine TetraphosphateTransaminases

Identifiers

PMID24670900
PMCPMC3966765
OpenAlexW2047658415

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.