Evidence map›Paper›PMID 24668813›Full record

ArticleThe Journal of biological chemistry2014

Nucleotide interactions of the human voltage-dependent anion channel.

Saskia Villinger, Karin Giller, Monika Bayrhuber, Adam Lange, Christian Griesinger, Stefan Becker, Markus Zweckstetter

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 29 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Saskia VillingerFrom the Department of NMR-based Structural Biology, Max Planck Institute for Biophysical Chemistry, Am Fassberg 11, 37077 Göttingen, Germany.
Karin Giller
Monika Bayrhuber
Adam Lange
Christian Griesinger
Stefan Becker
Markus Zweckstetter
Max Planck Institute for Biophysical Chemistry · DEGerman Center for Neurodegenerative Diseases · DE

Funding

European Research Council 282008
6 · The paper itself

Abstract

The voltage-dependent anion channel (VDAC) mediates and gates the flux of metabolites and ions across the outer mitochondrial membrane and is a key player in cellular metabolism and apoptosis. Here we characterized the binding of nucleotides to human VDAC1 (hVDAC1) on a single-residue level using NMR spectroscopy and site-directed mutagenesis. We find that hVDAC1 possesses one major binding region for ATP, UTP, and GTP that partially overlaps with a previously determined NADH binding site. This nucleotide binding region is formed by the N-terminal α-helix, the linker connecting the helix to the first β-strand and adjacent barrel residues. hVDAC1 preferentially binds the charged forms of ATP, providing support for a mechanism of metabolite transport in which direct binding to the charged form exerts selectivity while at the same time permeation of the Mg(2+)-complexed ATP form is possible.

Indexed as

Adenosine TriphosphateBiological Transport, ActiveGuanosine TriphosphateHumansNADProtein BindingProtein Structure, SecondaryUridine TriphosphateVoltage-Dependent Anion Channel 1Adenosine TriphosphateGuanosine TriphosphateNADUridine TriphosphateVDAC1 protein, humanVoltage-Dependent Anion Channel 1ATPInteractionsMembrane ProteinsNMRNucleotideOrganic Anion Channels

Identifiers

PMID24668813
PMCPMC4036348
OpenAlexW2053376267

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.