Evidence map›Paper›PMID 24668745›Full record

ArticleThe Plant cell2014

A duplicated NUCLEOLIN gene with antagonistic activity is required for chromatin organization of silent 45S rDNA in Arabidopsis.

Nathalie Durut, Mohamed Abou-Ellail, Frédéric Pontvianne, Sadhan Das, Hisae Kojima, Seiko Ukai, Anne de Bures, Pascale Comella, Sabine Nidelet, Stéphanie Rialle and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in The Plant cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
9.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Review
  3. Roles of methyl-CpG-binding-domain (MBD) protiens in regulation of biological processes in plants.Physiology and molecular biology of plants : an international journal of functional plant biology · 2025
    Review
  4. Review
  5. Transcriptional Silencing of 35S rDNA inInternational journal of molecular sciences · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. 45S rDNA DiversityPlants (Basel, Switzerland) · 2023
    Article
  12. Article
  13. Article
  14. Article
  15. The mFrontiers in microbiology · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Nathalie DurutCNRS, Laboratoire Génome et Développement des Plantes, Unité Mixte de Recherche 5096, 66860 Perpignan, France.
Mohamed Abou-Ellail
Frédéric Pontvianne
Sadhan Das
Hisae Kojima
Seiko Ukai
Anne de Bures
Pascale Comella
Sabine Nidelet
Stéphanie Rialle
Remy Merret
Manuel Echeverria
Philippe Bouvet
Kenzo Nakamura
Julio Sáez-Vásquez
Centre National de la Recherche Scientifique · FRNagoya University · JPÉcole Normale Supérieure de Lyon · FRMontpellier GenomiX · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In plants as well as in animals, hundreds to thousands of 45S rRNA gene copies localize in Nucleolus Organizer Regions (NORs), and the activation or repression of specific sets of rDNA depends on epigenetic mechanisms. Previously, we reported that the Arabidopsis thaliana nucleolin protein NUC1, an abundant and evolutionarily conserved nucleolar protein in eukaryotic organisms, is required for maintaining DNA methylation levels and for controlling the expression of specific rDNA variants in Arabidopsis. Interestingly, in contrast with animal or yeast cells, plants contain a second nucleolin gene. Here, we report that Arabidopsis NUC1 and NUC2 nucleolin genes are both required for plant growth and survival and that NUC2 disruption represses flowering. However, these genes seem to be functionally antagonistic. In contrast with NUC1, disruption of NUC2 induces CG hypermethylation of rDNA and NOR association with the nucleolus. Moreover, NUC2 loss of function triggers major changes in rDNA spatial organization, expression, and transgenerational stability. Our analyses indicate that silencing of specific rRNA genes is mostly determined by the active or repressed state of the NORs and that nucleolin proteins play a key role in the developmental control of this process.

Indexed as

Gene DuplicationArabidopsisChromatinDNA Copy Number VariationsDNA MethylationDNA, RibosomalGenes, PlantNucleolinPhosphoproteinsPromoter Regions, GeneticRNA-Binding ProteinsRNA, RibosomalChromatinDNA, RibosomalNucleolinPhosphoproteinsRNA-Binding ProteinsRNA, RibosomalRNA, ribosomal, 45S

Identifiers

PMID24668745
PMCPMC4001387
OpenAlexW2151659782

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.