Evidence map›Paper›PMID 24667815›Full record

ArticlePloS one2014

Polymorphisms at residue 222 of the hemagglutinin of pandemic influenza A(H1N1)pdm09: association of quasi-species to morbidity and mortality in different risk categories.

Paola Cristina Resende, Fernando C Motta, Maria de Lourdes A Oliveira, Tatiana S Gregianini, Sandra B Fernandes, Ana Luisa F Cury, Maria do Carmo D Rosa, Thiago Moreno L Souza, Marilda M Siqueira

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Paola Cristina ResendeLaboratório de Vírus Respiratórios e do Sarampo, Instituto Oswaldo Cruz/ FIOCRUZ, Rio de Janeiro, Rio de Janeiro, Brazil.
Fernando C MottaLaboratório de Vírus Respiratórios e do Sarampo, Instituto Oswaldo Cruz/ FIOCRUZ, Rio de Janeiro, Rio de Janeiro, Brazil.
Maria de Lourdes A OliveiraLaboratório de Vírus Respiratórios e do Sarampo, Instituto Oswaldo Cruz/ FIOCRUZ, Rio de Janeiro, Rio de Janeiro, Brazil.
Tatiana S GregianiniLaboratório Central de Saúde Pública do Estado do Rio de Grande do Sul -Fundação estadual de produção e pesquisa em saúde seção de virologia, Porto Alegre, Rio Grande do Sul, Brazil.
Sandra B FernandesLaboratório Central de Saúde Pública do Estado de Santa Catarina, Florianópolis, Santa Catarina, Brazil.
Ana Luisa F CuryLaboratório Central de Saúde Pública do Estado de Minas Gerais/Instituto Octávio Magalhães e Fundação Ezequiel Dias, Belo Horizonte, Minas Gerais, Brazil.
Maria do Carmo D RosaLaboratório Central de Saúde Pública do Estado do Paraná, Curitiba, Paraná, Brazil.
Thiago Moreno L SouzaLaboratório de Vírus Respiratórios e do Sarampo, Instituto Oswaldo Cruz/ FIOCRUZ, Rio de Janeiro, Rio de Janeiro, Brazil.
Marilda M SiqueiraLaboratório de Vírus Respiratórios e do Sarampo, Instituto Oswaldo Cruz/ FIOCRUZ, Rio de Janeiro, Rio de Janeiro, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The D222G substitution in the hemagglutinin (HA) gene of the pandemic influenza A(H1N1)pdm09 virus has been identified as a potential virulence marker, because this change allows for virus invasion deeper into the respiratory tract. In this study, we analyzed D, G and N polymorphisms at residue 222 by pyrosequencing (PSQ). We initially analyzed 401 samples from Brazilian patients. These were categorized with respect to clinical conditions due to influenza infection (mild, serious or fatal) and sub-stratified by risky factors. The frequency of mixed population of virus, with more than one polymorphism at residue 222, was significantly higher in serious (10.6%) and fatal (46.7%) influenza cases, whereas those who showed mild influenza infections were all infected by D222 wild-type. Mixtures of quasi-species showed a significant association of mortality, especially for those with risk factors, in special pregnant women. These results not only reinforce the association between D222G substitution and influenza A(H1N1)pdm09-associated morbidity and mortality, but also add the perspective that a worse clinical prognosis is most likely correlated with mixtures of quasi-species at this HA residue. Therefore, quasi-species may have a critical and underestimated role in influenza-related clinical outcomes.

Indexed as

Influenza, HumanPandemicsPolymorphism, GeneticPregnancy Complications, InfectiousFemaleHemagglutinin Glycoproteins, Influenza VirusHumansInfluenza A Virus, H1N1 SubtypeMalePregnancyRisk FactorsH1N1 virus hemagglutininHemagglutinin Glycoproteins, Influenza Virus

Identifiers

PMID24667815
PMCPMC3965456

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.