Evidence map›Paper›PMID 24666523›Full record

ArticleBJU international2015

Genetic polymorphisms modify bladder cancer recurrence and survival in a USA population-based prognostic study.

Angeline S Andrew, Jiang Gui, Ting Hu, Asaf Wyszynski, Carmen J Marsit, Karl T Kelsey, Alan R Schned, Sam A Tanyos, Eben M Pendleton, Rebecca M Ekstrom and 5 more

Open access · greenAbstract read
In one paragraph

Article in BJU international, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
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  7. Article
  8. Article
  9. Experimental and therapeutic medicine · 2020
    Article
  10. Article
  11. Impact of Long Non-Coding RNAJournal of clinical medicine · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Angeline S AndrewNorris Cotton Cancer Center, Geisel School of Medicine, Lebanon, NH, USA.
Jiang Gui
Ting Hu
Asaf Wyszynski
Carmen J Marsit
Karl T Kelsey
Alan R Schned
Sam A Tanyos
Eben M Pendleton
Rebecca M Ekstrom
Zhongze Li
Michael S Zens
Mark Borsuk
Jason H Moore
Margaret R Karagas
USC Norris Comprehensive Cancer Center · USCotton (United States) · USBrown University · US

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Fred W Kolling IV · 1985 to 2026
$91.3M
VARIATION IN BIOACCUMULATION AND BIOMAGNIFICATION OF METALS IN NORTHERN US LAKESP42ES007373 · NIEHS · DARTMOUTH COLLEGE · PI STANTON, BRUCE A. · 1995 to 2019
$52.0M
Translational Research Support CoreP30ES000002 · NIEHS · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI JAIME ELIZABETH HART · 1985 to 2026
$44.6M
THE ROLE OF CAL IN CIF-MEDIATED DEGRADATION OF CFTRP20RR018787 · NCRR · DARTMOUTH COLLEGE · PI STANTON, BRUCE A. · 2003 to 2011
$21.9M
VANADIUM AND HUMAN HEALTHP42ES005947 · NIEHS · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI KELSEY, KARL TIMOTHY · 1992 to 2006
$19.6M
NH CANCER REGISTRY NH COMPREHE CANCER CONTR PROG NH BREAST & CERVICAL CANCER PROGU58DP000798 · DP · NH STATE DEPT/HLTH STATISTICS/DATA MGMT · PI MONTERO, JOSE THEIR · 2007 to 2011
$12.1M
NONMELANOMA SKIN CANCER IN NEW HAMPSHIRER01CA057494 · NCI · DARTMOUTH COLLEGE · PI KARAGAS, MARGARET RITA · 1993 to 2015
$10.9M
Quantitative Biology Research InstituteP20GM103534 · NIGMS · DARTMOUTH COLLEGE · PI AMOS, CHRISTOPHER I. · 2012 to 2016
$8.6M
The Boston Collaborative Oral Cancer StudyR01CA078609 · NCI · HARVARD UNIVERSITY (SCH OF PUBLIC HLTH) · PI KELSEY, KARL TIMOTHY · 1999 to 2010
$5.3M
MOLECULAR EPIDEMIOLOGY OF NON-MELANOMA SKIN CANCERR01CA082354 · NCI · UNIVERSITY OF MINNESOTA · PI NELSON, HEATHER HAMMOND · 1999 to 2011
$4.2M
Machine Learning Prediction of Cancer SusceptibilityR01LM009012 · NLM · UNIVERSITY OF PENNSYLVANIA · PI MOORE, JASON H. · 2006 to 2014
$3.3M
QUANTITATIVE BIOLOGY RESEARCH INSTITUTEP20RR024475 · NCRR · DARTMOUTH COLLEGE · PI MOORE, JASON H. · 2011 to 2011
$2.3M
NCCDPHP CDC HHS U58 DP000798NCCDPHP CDC HHS U58/DP000798NCI NIH HHS CA078609NCI NIH HHS CA099500NCI NIH HHS CA102327NCI NIH HHS CA121382NCI NIH HHS CA57494NCI NIH HHS CA82354NCI NIH HHS K07 CA102327NCI NIH HHS P30 CA023108NCI NIH HHS R01 CA057494NCI NIH HHS R01 CA078609NCI NIH HHS R01 CA082354NCI NIH HHS R03 CA099500NCI NIH HHS R03 CA121382NCI NIH HHS R21 CA182659NCRR NIH HHS 5P20RR024475-02NCRR NIH HHS P20 RR018787NCRR NIH HHS P20 RR024475NCRR NIH HHS RR018787NCRR NIH HHS RR028309NIEHS NIH HHS 5 P42 ES05947NIEHS NIH HHS ES00002NIEHS NIH HHS ES07373NIEHS NIH HHS P30 ES000002NIEHS NIH HHS P42 ES005947NIEHS NIH HHS P42 ES007373NIGMS NIH HHS 8P20GM103534-02NIGMS NIH HHS P20 GM103534NLM NIH HHS LM009012NLM NIH HHS R01 LM009012
6 · The paper itself

Abstract

objectiveTo identify genetic variants that modify bladder cancer prognosis focusing on genes involved in major biological carcinogenesis processes (apoptosis, proliferation, DNA repair, hormone regulation, immune surveillance, and cellular metabolism), as nearly half of patients with bladder cancer experience recurrences reliable predictors of this recurrent phenotype are needed to guide surveillance and treatment. PATIENTS AND

methodsWe analysed variant genotypes hypothesised to modify these processes in 563 patients with urothelial-cell carcinoma enrolled in a population-based study of incident bladder cancer conducted in New Hampshire, USA. After diagnosis, patients were followed over time to ascertain recurrence and survival status, making this one of the first population-based studies with detailed prognosis data. Cox proportional hazards regression was used to assess the relationship between single nucleotide polymorphisms (SNPs) and prognosis endpoints.

resultsPatients with aldehyde dehydrogenase 2 (ALDH2) variants had a shorter time to first recurrence (adjusted non-invasive hazard ratio [HR] 1.90, 95% confidence interval [CI] 1.29-2.78). There was longer survival among patients with non-invasive tumours associated with DNA repair X-ray repair cross-complementing protein 4 (XRCC4) heterozygous genotype compared with wild-type (adjusted HR 0.53, 95% CI 0.38-0.74). Time to recurrence was shorter for patients who had a variant allele in vascular cellular adhesion molecule 1 (VCAM1) and were treated with immunotherapy (P interaction < 0.001).

conclusionsOur analysis suggests candidate prognostic SNPs that could guide personalised bladder cancer surveillance and treatment.

Indexed as

Polymorphism, Single NucleotideAdultAgedAldehyde DehydrogenaseAldehyde Dehydrogenase, MitochondrialAntineoplastic AgentsCarcinoma, Transitional CellDNA-Binding ProteinsDNA RepairFemaleGenetic VariationGenotypeHumansMaleMiddle AgedMolecular Targeted TherapyAldehyde DehydrogenaseAldehyde Dehydrogenase, MitochondrialALDH2 protein, humanAntineoplastic AgentsDNA-Binding ProteinsVascular Cell Adhesion Molecule-1XRCC4 protein, humanbladder cancerimmunepolymorphismprognosisrecurrencesurvival

Identifiers

PMID24666523
PMCPMC4533837
OpenAlexW1818120421

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.