Evidence map›Paper›PMID 24662821›Full record

ArticleOncogene2015

Involvement of G-quadruplex structures in regulation of human RET gene expression by small molecules in human medullary thyroid carcinoma TT cells.

Y-J Shin, V Kumarasamy, D Camacho, D Sun

Abstract read
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In one paragraph

Article in Oncogene, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 37 citations in OpenAlex.

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  18. High-resolution three-dimensional NMR structure of theThe Journal of biological chemistry · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Y-J ShinDepartment of Pharmacology & Toxicology, College of Pharmacy, University of Arizona, Tucson, AZ, USA.
V KumarasamyDepartment of Pharmacology & Toxicology, College of Pharmacy, University of Arizona, Tucson, AZ, USA.
D CamachoDepartment of Pharmacology & Toxicology, College of Pharmacy, University of Arizona, Tucson, AZ, USA.
D Sun1] Department of Pharmacology & Toxicology, College of Pharmacy, University of Arizona, Tucson, AZ, USA [2] BIO5 Institute, Tucson, AZ, USA [3] Arizona Cancer Center, Tucson, AZ, USA.
University of Arizona · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The RET (rearranged during transfection) proto-oncogene encodes a receptor tyrosine kinase for members of the glial cell line-derived neurotrophic factor family of extracellular signaling molecules. The activating germline point mutations in the RET, which are known to induce oncogenic activation of RET tyrosine kinase, are associated with the development of medullary thyroid carcinoma (MTC) and pathogenesis of multiple endocrine neoplasia type 2 (MEN2). The polypurine/polypyrimidine tract in the proximal promoter region of the human RET gene (-51 to -33 relative to transcription start site) is essential for basal transcriptional activity of this gene. This tract consists of a guanine-rich sequence containing five runs of at least three contiguous guanines separated by one or more bases, conforming to a general motif capable of forming an intramolecular G-quadruplex. Here, we show that specific G-quadruplex structures formed in the RET promoter region act to repress the transcription of this gene, and transcription of this gene can be controlled by ligand-mediated G-quadruplex stabilization. In this study, NSC194598, a derivative of indeno[1,2,3-de]quinazoline, was found to be a novel G-quadruplex interactive agent that interfered with transcriptional activation of mutated RET gene in human medullary thyroid carcinoma TT cells. This compound significantly reduced endogenous RET protein levels and increased apoptosis in these cells. Our results provide further support for the idea that G-quadruplex structures may have a critical role in transcriptional regulation of the RET gene in vivo, providing insight into a novel strategy for transcriptional repression of this gene by small molecules.

Indexed as

Gene Expression Regulation, NeoplasticG-QuadruplexesApoptosisBase SequenceCarcinoma, NeuroendocrineCell LineCell Line, TumorHumansNucleotide MotifsPromoter Regions, GeneticProtein BindingProto-Oncogene MasProto-Oncogene Proteins c-retQuinazolinesThyroid NeoplasmsTranscriptional ActivationMAS1 protein, humanProto-Oncogene MasProto-Oncogene Proteins c-retQuinazolines

Identifiers

PMID24662821
OpenAlexW2090249229

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.