Evidence map›Paper›PMID 24658578›Full record

ArticlePloS one2014

Semi-automatic classification of birdsong elements using a linear support vector machine.

Ryosuke O Tachibana, Naoya Oosugi, Kazuo Okanoya

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

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  6. Recent Advances at the Interface of Neuroscience and Artificial Neural Networks.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Review
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  17. Variability in the temporal parameters in the song of the Bengalese finch (Lonchura striata var. domestica).Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2015
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ryosuke O TachibanaDepartment of Life Sciences, Graduate School of Arts & Sciences, The University of Tokyo, Meguro, Tokyo, Japan.
Naoya OosugiDepartment of Life Sciences, Graduate School of Arts & Sciences, The University of Tokyo, Meguro, Tokyo, Japan.
Kazuo OkanoyaDepartment of Life Sciences, Graduate School of Arts & Sciences, The University of Tokyo, Meguro, Tokyo, Japan; Japan Science and Technology Agency, ERATO, Okanoya Emotional Information Project, RIKEN, Wako, Saitama, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Birdsong provides a unique model for understanding the behavioral and neural bases underlying complex sequential behaviors. However, birdsong analyses require laborious effort to make the data quantitatively analyzable. The previous attempts had succeeded to provide some reduction of human efforts involved in birdsong segment classification. The present study was aimed to further reduce human efforts while increasing classification performance. In the current proposal, a linear-kernel support vector machine was employed to minimize the amount of human-generated label samples for reliable element classification in birdsong, and to enable the classifier to handle highly-dimensional acoustic features while avoiding the over-fitting problem. Bengalese finch's songs in which distinct elements (i.e., syllables) were aligned in a complex sequential pattern were used as a representative test case in the neuroscientific research field. Three evaluations were performed to test (1) algorithm validity and accuracy with exploring appropriate classifier settings, (2) capability to provide accuracy with reducing amount of instruction dataset, and (3) capability in classifying large dataset with minimized manual labeling. The results from the evaluation (1) showed that the algorithm is 99.5% reliable in song syllables classification. This accuracy was indeed maintained in evaluation (2), even when the instruction data classified by human were reduced to one-minute excerpt (corresponding to 300-400 syllables) for classifying two-minute excerpt. The reliability remained comparable, 98.7% accuracy, when a large target dataset of whole day recordings (∼30,000 syllables) was used. Use of a linear-kernel support vector machine showed sufficient accuracies with minimized manually generated instruction data in bird song element classification. The methodology proposed would help reducing laborious processes in birdsong analysis without sacrificing reliability, and therefore can help accelerating behavior and studies using songbirds.

Indexed as

Support Vector MachineVocalization, AnimalAnimalsMaleReproducibility of ResultsSongbirds

Identifiers

PMID24658578
PMCPMC3962446

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.