Evidence map›Paper›PMID 24657395›Full record

ArticleBiochimica et biophysica acta2014

Randomly organized lipids and marginally stable proteins: a coupling of weak interactions to optimize membrane signaling.

Anne M Rice, Ryan Mahling, Michael E Fealey, Anika Rannikko, Katie Dunleavy, Troy Hendrickson, K Jean Lohese, Spencer Kruggel, Hillary Heiling, Daniel Harren and 3 more

Abstract read
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In one paragraph

Article in Biochimica et biophysica acta, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Anne M RiceDepartment of Chemistry and Biochemistry, University of Minnesota Duluth, Duluth, MN, USA; Department of Cell Physiology and Molecular Biophysics, Texas Tech University Health Sciences Center, Lubbock, TX, USA.
Ryan MahlingDepartment of Chemistry and Biochemistry, University of Minnesota Duluth, Duluth, MN, USA.
Michael E FealeyDepartment of Chemistry and Biochemistry, University of Minnesota Duluth, Duluth, MN, USA.
Anika RannikkoDepartment of Chemistry and Biochemistry, University of Minnesota Duluth, Duluth, MN, USA.
Katie DunleavyDepartment of Chemistry and Biochemistry, University of Minnesota Duluth, Duluth, MN, USA.
Troy HendricksonDepartment of Chemistry and Biochemistry, University of Minnesota Duluth, Duluth, MN, USA.
K Jean LoheseDepartment of Chemistry and Biochemistry, University of Minnesota Duluth, Duluth, MN, USA.
Spencer KruggelDepartment of Chemistry and Biochemistry, University of Minnesota Duluth, Duluth, MN, USA.
Hillary HeilingDepartment of Chemistry and Biochemistry, University of Minnesota Duluth, Duluth, MN, USA.
Daniel HarrenDepartment of Chemistry and Biochemistry, University of Minnesota Duluth, Duluth, MN, USA.
R Bryan SuttonDepartment of Cell Physiology and Molecular Biophysics, Texas Tech University Health Sciences Center, Lubbock, TX, USA.
John PastorDepartment of Biology, University of Minnesota Duluth, Duluth, MN, USA.
Anne HinderliterDepartment of Chemistry and Biochemistry, University of Minnesota Duluth, Duluth, MN, USA. Electronic address: ahinderl@d.umn.edu.
University of Minnesota, Duluth · USTexas Tech University · US

Funding

Human dysferlin and its implications in Limb-Girdle Muscular DystrophyR01AR063634 · NIAMS · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI SUTTON, ROGER BRYAN · 2014 to 2018
$1.8M
6 · The paper itself

Abstract

Eukaryotic lipids in a bilayer are dominated by weak cooperative interactions. These interactions impart highly dynamic and pliable properties to the membrane. C2 domain-containing proteins in the membrane also interact weakly and cooperatively giving rise to a high degree of conformational plasticity. We propose that this feature of weak energetics and plasticity shared by lipids and C2 domain-containing proteins enhance a cell's ability to transduce information across the membrane. We explored this hypothesis using information theory to assess the information storage capacity of model and mast cell membranes, as well as differential scanning calorimetry, carboxyfluorescein release assays, and tryptophan fluorescence to assess protein and membrane stability. The distribution of lipids in mast cell membranes encoded 5.6-5.8bits of information. More information resided in the acyl chains than the head groups and in the inner leaflet of the plasma membrane than the outer leaflet. When the lipid composition and information content of model membranes were varied, the associated C2 domains underwent large changes in stability and denaturation profile. The C2 domain-containing proteins are therefore acutely sensitive to the composition and information content of their associated lipids. Together, these findings suggest that the maximum flow of signaling information through the membrane and into the cell is optimized by the cooperation of near-random distributions of membrane lipids and proteins. This article is part of a Special Issue entitled: Interfacially Active Peptides and Proteins. Guest Editors: William C. Wimley and Kalina Hristova.

Indexed as

Calorimetry, Differential ScanningCell MembraneHumansLipid BilayersLipidsMast CellsMembrane MicrodomainsMembrane ProteinsPhosphatidylcholinesProtein Structure, SecondaryProtein Structure, TertiarySignal TransductionLipid BilayersLipidsMembrane ProteinsPhosphatidylcholinesC2 domainDisorderInformation theoryMembrane domainSignaling

Identifiers

PMID24657395
OpenAlexW1982069396

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.