Evidence map›Paper›PMID 24655859›Full record

ArticleJournal of the American College of Surgeons2014

Race disparities in peptide profiles of North American and Kenyan Wilms tumor specimens.

Jaime M Libes, Erin H Seeley, Ming Li, Jason R Axt, Janene Pierce, Hernan Correa, Mark Newton, Erik Hansen, Audra Judd, Hayes McDonald and 6 more

Abstract readComparative Study
In one paragraph

Article in Journal of the American College of Surgeons, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. FXR1 expression domain in Wilms tumor.Journal of pediatric surgery · 2019
    Article
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  7. Review
  8. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 2 countries.

Jaime M LibesDivision of Pediatric Hematology and Oncology, Vanderbilt University School of Medicine, Nashville, TN.
Erin H SeeleyDepartment of Biochemistry, Mass Spectrometry Research Center, Tissue Core, Vanderbilt University School of Medicine, Nashville, TN.
Ming LiDepartment of Biostatistics, Vanderbilt University School of Medicine, Nashville, TN.
Jason R AxtDepartment of Pediatric Surgery, Vanderbilt University School of Medicine, Nashville, TN.
Janene PierceDepartment of Pediatric Surgery, Vanderbilt University School of Medicine, Nashville, TN.
Hernan CorreaDepartment of Pathology, Vanderbilt University School of Medicine, Nashville, TN.
Mark NewtonDivision of Pediatric Anesthesiology, Vanderbilt University School of Medicine, Nashville, TN; Kijabe Mission Hospital, Kenya.
Erik HansenDepartment of Pediatric Surgery, Vanderbilt University School of Medicine, Nashville, TN; Kijabe Mission Hospital, Kenya.
Audra JuddDepartment of Biochemistry, Mass Spectrometry Research Center, Tissue Core, Vanderbilt University School of Medicine, Nashville, TN.
Hayes McDonaldProteomics Laboratory, Vanderbilt University School of Medicine, Nashville, TN.
Richard M CaprioliDepartment of Biochemistry, Mass Spectrometry Research Center, Tissue Core, Vanderbilt University School of Medicine, Nashville, TN.
Arlene NaranjoChildren's Oncology Group Statistics and Data Center, Department of Biostatistics, University of Florida, Gainseville, FL.
Vicki HuffChildren's Oncology Group Statistics and Data Center, Department of Biostatistics, University of Florida, Gainseville, FL.
James A O'NeillDepartment of Pediatric Surgery, Vanderbilt University School of Medicine, Nashville, TN; Kijabe Mission Hospital, Kenya.
Harold N LovvornDepartment of Pediatric Surgery, Vanderbilt University School of Medicine, Nashville, TN. Electronic address: harold.lovvorn@vanderbilt.edu.
Kenyan Wilms Tumor Consortium
Vanderbilt University · USChildren's Oncology Group · USKijabe Hospital · KE

Funding

COG FOREIGN ACCRUALU10CA098543 · NCI · NATIONAL CHILDHOOD CANCER FOUNDATION · PI ADAMSON, PETER C. · 2003 to 2013
$335.5M
COG SDMC - Statistics CoreU10CA180899 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI TODD A ALONZO · 2014 to 2026
$132.8M
Children's Oncology Group Statistics &Data Center GrantU10CA098413 · NCI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI ANDERSON, JAMES R · 2003 to 2013
$67.5M
Training (pp 214-245)P41GM103391 · NIGMS · VANDERBILT UNIVERSITY · PI REYZER, MICHELLE L · 2012 to 2020
$17.7M
Surgical Oncology Training GrantT32CA106183 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI James Richard Goldenring · 2004 to 2026
$6.0M
Spatial Analysis of Molecules in Tissue using MALDI-MSR01GM058008 · NIGMS · VANDERBILT UNIVERSITY · PI CAPRIOLI, RICHARD M · 1998 to 2015
$5.8M
IMAGING MASS SPECTROMETRY RESEARCH RESOURCE AT VANDERBILT UNIVERSITYP41RR031461 · NCRR · VANDERBILT UNIVERSITY · PI CAPRIOLI, RICHARD M · 2011 to 2011
$2.2M
MolecularAnalysis of Ethnic Variations in Wilms' TumorR21CA155946 · NCI · VANDERBILT UNIVERSITY · PI LOVVORN, HAROLD NEWTON · 2011 to 2012
$377k
NCI NIH HHS 5R21CA155946-02NCI NIH HHS 5T32CA106183-08NCI NIH HHS R21 CA155946NCI NIH HHS T32 CA106183NCI NIH HHS U10 CA098413NCI NIH HHS U10 CA098543NCI NIH HHS U10 CA180899NCI NIH HHS U10CA98413NCI NIH HHS U10 CA98543NCRR NIH HHS 8P41RR031461NCRR NIH HHS P41 RR031461NIGMS NIH HHS 5R01GM58008NIGMS NIH HHS 8P41GM103391NIGMS NIH HHS P41 GM103391NIGMS NIH HHS R01 GM058008
6 · The paper itself

Abstract

backgroundWilms tumor (WT) is the most common childhood kidney cancer worldwide and arises in children of black African ancestry with greater frequency and severity than other race groups. A biologic basis for this pediatric cancer disparity has not been previously determined. We hypothesized that unique molecular fingerprints might underlie the variable incidence and distinct disease characteristics of WT observed between race groups. STUDY

designTo evaluate molecular disparities between WTs of different race groups, the Children's Oncology Group provided 80 favorable histology specimens divided evenly between black and white patients and matched for disease characteristics. As a surrogate of black sub-Saharan African patients, we also analyzed 18 Kenyan WT specimens. Tissues were probed for peptide profiles using matrix-assisted laser desorption ionization time of flight imaging mass spectrometry. To control for histologic variability within and between specimens, cellular regions were analyzed separately as triphasic (containing blastema, epithelia, and stroma), blastema only, and stroma only. Data were queried using ClinProTools and statistically analyzed.

resultsPeptide profiles, detected in triphasic WT regions, recognized race with good accuracy, which increased for blastema- or stroma-only regions. Peptide profiles from North American WTs differed between black and white race groups but were far more similar in composition than Kenyan specimens. Individual peptides were identified that also associated with WT patient and disease characteristics (eg, treatment failure and stage). Statistically significant peptide fragments were used to sequence proteins, revealing specific cellular signaling pathways and candidate drug targets.

conclusionsWilms tumor specimens arising among different race groups show unique molecular fingerprints that could explain disparate incidences and biologic behavior and that could reveal novel therapeutic targets.

Indexed as

Black PeopleHealth Status DisparitiesWhite PeopleAlgorithmsBiomarkers, TumorBlack or African AmericanChildChild, PreschoolCluster AnalysisFemaleHumansKenyaKidney NeoplasmsMalePrincipal Component AnalysisProteomeBiomarkers, TumorProteome

Identifiers

PMID24655859
PMCPMC3964369
OpenAlexW2042936748

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.