ArticleBMC plant biology2014
Genes associated with agronomic traits in non-heading Chinese cabbage identified by expression profiling.
Article in BMC plant biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.
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Who cites it
15 citing papers in PubMed.
- Construction and evaluation ofFrontiers in plant science · 2025Article
- In-Depth Characterization ofPlants (Basel, Switzerland) · 2024Article
- Ectopic Expression ofGenes · 2023Article
- Comprehensive transcriptome analysis reveals heat-responsive genes in flowering Chinese cabbage (Frontiers in plant science · 2022Article
- Overexpression of a Pak Choi Gene,Genes · 2021Article
- Ectopic expression of nucleolar DEAD-Box RNA helicase OsTOGR1 confers improved heat stress tolerance in transgenic Chinese cabbage.Plant cell reports · 2020Article
- Brassica rapa orphan genes largely affect soluble sugar metabolism.Horticulture research · 2020Article
- Ectopic Expression of a Pak-choi YABBY Gene,Genes · 2020Article
- BcMAF2 activates BcTEM1 and represses flowering in Pak-choi (Brassica rapa ssp. chinensis).Plant molecular biology · 2019Article
- Network modularity influences plant reproduction in a mosaic tropical agroecosystem.Proceedings. Biological sciences · 2019Article
- Article
- De novo transcriptome sequencing of Acer palmatum and comprehensive analysis of differentially expressed genes under salt stress in two contrasting genotypes.Molecular genetics and genomics : MGG · 2016Article
- Comparative Transcriptome Analysis Reveals Heat-Responsive Genes in Chinese Cabbage (Brassica rapa ssp. chinensis).Frontiers in plant science · 2016Article
- Integrative Analysis of mRNA and miRNA Expression Profiles of the Tuberous Root Development at Seedling Stages in Turnips.PloS one · 2015Article
- Gene Expressing and sRNA Sequencing Show That Gene Differentiation Associates with a Yellow Acer palmatum Mutant Leaf in Different Light Conditions.BioMed research international · 2015Article
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8 authors.
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Abstract
backgroundThe genomes of non-heading Chinese cabbage (Brassica rapa ssp. chinensis), heading Chinese cabbage (Brassica rapa ssp. pekinensis) and their close relative Arabidopsis thaliana have provided important resources for studying the evolution and genetic improvement of cruciferous plants. Natural growing conditions present these plants with a variety of physiological challenges for which they have a repertoire of genes that ensure adaptability and normal growth. We investigated the differential expressions of genes that control adaptability and development in plants growing in the natural environment to study underlying mechanisms of their expression.
resultsUsing digital gene expression tag profiling, we constructed an expression profile to identify genes related to important agronomic traits under natural growing conditions. Among three non-heading Chinese cabbage cultivars, we found thousands of genes that exhibited significant differences in expression levels at five developmental stages. Through comparative analysis and previous reports, we identified several candidate genes associated with late flowering, cold tolerance, self-incompatibility, and leaf color. Two genes related to cold tolerance were verified using quantitative real-time PCR.
conclusionsWe identified a large number of genes associated with important agronomic traits of non-heading Chinese cabbage. This analysis will provide a wealth of resources for molecular-assisted breeding of cabbage. The raw data and detailed results of this analysis are available at the website http://nhccdata.njau.edu.cn.
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