Evidence map›Paper›PMID 24654932›Full record

ArticleThe Biochemical journal2014

Trafficking modulator TENin1 inhibits endocytosis, causes endomembrane protein accumulation at the pre-vacuolar compartment and impairs gravitropic response in Arabidopsis thaliana.

Rupesh Paudyal, Adam Jamaluddin, James P Warren, Siamsa M Doyle, Stéphanie Robert, Stuart L Warriner, Alison Baker

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Biochemical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Regulation of PIN-FORMED Protein Degradation.International journal of molecular sciences · 2023
    Review
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. New insights into root gravitropic signalling.Journal of experimental botany · 2015
    Review
  9. Review
  10. Plant chemical biology: are we meeting the promise?Frontiers in plant science · 2014
    Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Rupesh Paudyal*Centre for Plant Sciences, University of Leeds, Leeds LS2 9JT, U.K.
Adam Jamaluddin*Centre for Plant Sciences, University of Leeds, Leeds LS2 9JT, U.K.
James P Warren†School of Chemistry, Faculty of Mathematics and Physical Sciences, University of Leeds, Leeds LS2 9JT, U.K.
Siamsa M Doyle‡Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences (SLU), Umeå 90183, Sweden.
Stéphanie Robert‡Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences (SLU), Umeå 90183, Sweden.
Stuart L Warriner†School of Chemistry, Faculty of Mathematics and Physical Sciences, University of Leeds, Leeds LS2 9JT, U.K.
Alison Baker*Centre for Plant Sciences, University of Leeds, Leeds LS2 9JT, U.K.
Swedish University of Agricultural Sciences · SEUmeå Plant Science Centre · SE

Funding

Biotechnology and Biological Sciences Research Council BB/E013740/1
6 · The paper itself

Abstract

Auxin gradients are established and maintained by polarized distribution of auxin transporters that undergo constitutive endocytic recycling from the PM (plasma membrane) and are essential for the gravitropic response in plants. The present study characterizes an inhibitor of endomembrane protein trafficking, TE1 (trafficking and endocytosis inhibitor 1/TENin1) that reduces gravitropic root bending in Arabidopsis thaliana seedlings. Short-term TE1 treatment causes accumulation of PM proteins, including the BR (brassinosteroid) receptor BRI1 (BR insensitive 1), PIP2a (PM intrinsic protein 2a) and the auxin transporter PIN2 (PIN-FORMED 2) in a PVC (pre-vacuolar related compartment), which is sensitive to BFA (Brefeldin A). This compound inhibits endocytosis from the PM and promotes trafficking to the vacuole, consistent with inhibition of retrieval of proteins to the TGN (trans-Golgi network) from the PVC and the PM. However, trafficking of newly synthesized proteins to the PM is unaffected. The short-term protein trafficking inhibition and long-term effect on plant growth and survival caused by TE1 were fully reversible upon drug washout. Structure-activity relationship studies revealed that only minor modifications were possible without loss of biological activity. Diversity in Arabidopsis ecotypes was also exploited to identify two Arabidopsis accessions that display reduced sensitivity to TE1. This compound and the resistant Arabidopsis accessions may be used as a resource in future studies to better understand endomembrane trafficking in plants.

Indexed as

ArabidopsisArabidopsis ProteinsCell MembraneEndocytosisGravitropismPlant RootsProtein TransportPyridinium CompoundsQuaternary Ammonium CompoundsSeedlingstrans-Golgi NetworkVacuolesArabidopsis ProteinsAT5G57090 protein, ArabidopsisFM 4-64Pyridinium CompoundsQuaternary Ammonium Compounds

Identifiers

PMID24654932
PMCPMC4100570
OpenAlexW2024036978

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.