Evidence map›Paper›PMID 24654890›Full record

ArticleACS nano2014

Programming nanopore ion flow for encoded multiplex microRNA detection.

Xinyue Zhang, Yong Wang, Brandon L Fricke, Li-Qun Gu

Open access · bronzeAbstract read
In one paragraph

Article in ACS nano, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 104 citations in OpenAlex.

  1. Article
  2. Article
  3. Real-time label-free detection of dynamic aptamer-small molecule interactions using a nanopore nucleic acid conformational sensor.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
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  10. Article
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  12. Article
  13. Lateral Flow Test for Visual Detection of Multiple MicroRNAs.Sensors and actuators. B, Chemical · 2018
    Article
  14. Label-Free Detection of DNA Mutations by Nanopore Analysis.ACS applied materials & interfaces · 2018
    Article
  15. Membrane protein-based biosensors.Journal of the Royal Society, Interface · 2018
    Review
  16. Article
  17. Article
  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Xinyue ZhangDepartment of Bioengineering and Dalton Cardiovascular Research Center, University of Missouri , Columbia, Missouri 65211, United States.
Yong Wang
Brandon L Fricke
Li-Qun Gu
University of Missouri · US

Funding

Programmable Multi-Target Detection Using an Aptamer-Integrated NanoporeR01GM079613 · NIGMS · UNIVERSITY OF MISSOURI-COLUMBIA · PI GU, LI-QUN (ANDREW) · 2007 to 2011
$1.3M
Nanopore single-molecule dielectrophoresis and biomedical detectionR01GM114204 · NIGMS · UNIVERSITY OF MISSOURI-COLUMBIA · PI GU, LI-QUN (ANDREW) · 2015 to 2017
$887k
NIGMS NIH HHS P01GM079613NIGMS NIH HHS R01 GM079613NIGMS NIH HHS R01 GM114204
6 · The paper itself

Abstract

Many efforts are being made in translating the nanopore into an ultrasensitive single-molecule platform for various genetic and epigenetic detections. However, compared with current approaches including PCR, the low throughput limits the nanopore applications in biological research and clinical settings, which usually requires simultaneous detection of multiple biomarkers for accurate disease diagnostics. Herein we report a barcode probe approach for multiple nucleic acid detection in one nanopore. Instead of directly identifying different targets in a nanopore, we designed a series of barcode probes to encode different targets. When the probe is bound with the target, the barcode group polyethylene glycol attached on the probe through click chemistry can specifically modulate nanopore ion flow. The resulting signature serves as a marker for the encoded target. Therefore counting different signatures in a current recording allows simultaneous analysis of multiple targets in one nanopore. The principle of this approach was verified by using a panel of cancer-derived microRNAs as the target, a type of biomarker for cancer detection.

Indexed as

NanoporesBiomarkersClick ChemistryDNA ProbesMicroRNAsNanotechnologyNucleic Acid HybridizationBiomarkersDNA ProbesMicroRNAs

Identifiers

PMID24654890
PMCPMC4004327
OpenAlexW2058659693

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.