Evidence map›Paper›PMID 24653729›Full record

ReviewFrontiers in plant science2014

ER bodies in plants of the Brassicales order: biogenesis and association with innate immunity.

Ryohei T Nakano, Kenji Yamada, Paweł Bednarek, Mikio Nishimura, Ikuko Hara-Nishimura

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in plant science, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
10.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 103 citations in OpenAlex.

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  7. Proteomic Analysis of Proteins Related to Defense Responses inInternational journal of molecular sciences · 2023
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  19. ER Bodies Are Induced byMolecular plant-microbe interactions : MPMI · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 5 institutions in 3 countries.

Ryohei T NakanoDepartment of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research Cologne, Germany.
Kenji YamadaDepartment of Cell Biology, National Institute for Basic Biology Okazaki, Japan ; Department of Basic Biology, School of Life Science, The Graduate University for Advanced Studies (Sokendai) Okazaki, Japan.
Paweł BednarekInstitute of Bioorganic Chemistry, Polish Academy of Sciences Poznañ, Poland.
Mikio NishimuraDepartment of Cell Biology, National Institute for Basic Biology Okazaki, Japan ; Department of Basic Biology, School of Life Science, The Graduate University for Advanced Studies (Sokendai) Okazaki, Japan.
Ikuko Hara-NishimuraDepartment of Botany, Graduate School of Science, Kyoto University Kyoto, Japan.
Institute of Bioorganic Chemistry, Polish Academy of Sciences · PLKyoto University · JPMax Planck Institute for Plant Breeding Research · DENational Institute for Basic Biology · JPThe Graduate University for Advanced Studies, SOKENDAI · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The endoplasmic reticulum (ER) forms highly organized network structures composed of tubules and cisternae. Many plant species develop additional ER-derived structures, most of which are specific for certain groups of species. In particular, a rod-shaped structure designated as the ER body is produced by plants of the Brassicales order, which includes Arabidopsis thaliana. Genetic analyses and characterization of A. thaliana mutants possessing a disorganized ER morphology or lacking ER bodies have provided insights into the highly organized mechanisms responsible for the formation of these unique ER structures. The accumulation of proteins specific for the ER body within the ER plays an important role in the formation of ER bodies. However, a mutant that exhibits morphological defects of both the ER and ER bodies has not been identified. This suggests that plants in the Brassicales order have evolved novel mechanisms for the development of this unique organelle, which are distinct from those used to maintain generic ER structures. In A. thaliana, ER bodies are ubiquitous in seedlings and roots, but rare in rosette leaves. Wounding of rosette leaves induces de novo formation of ER bodies, suggesting that these structures are associated with resistance against pathogens and/or herbivores. ER bodies accumulate a large amount of β-glucosidases, which can produce substances that potentially protect against invading pests. Biochemical studies have determined that the enzymatic activities of these β-glucosidases are enhanced during cell collapse. These results suggest that ER bodies are involved in plant immunity, although there is no direct evidence of this. In this review, we provide recent perspectives of ER and ER body formation in A. thaliana, and discuss clues for the functions of ER bodies. We highlight defense strategies against biotic stress that are unique for the Brassicales order, and discuss how ER structures could contribute to these strategies.

Indexed as

endoplasmic reticulumER bodyglucosinolateorganelle biogenesisplant defensessecondary metabolitesβ-glucosidase

Identifiers

PMID24653729
PMCPMC3947992
OpenAlexW2098527280

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.