Evidence map›Paper›PMID 24651614›Full record

ArticlePloS one2014

QTLs for seed vigor-related traits identified in maize seeds germinated under artificial aging conditions.

Zanping Han, Lixia Ku, Zhenzhen Zhang, Jun Zhang, Shulei Guo, Haiying Liu, Ruifang Zhao, Zhenzhen Ren, Liangkun Zhang, Huihui Su and 2 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 92 citations in OpenAlex.

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  8. A Golden2-like transcription factor regulates Brassica napus seed vigor after artificial aging.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
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  18. Review
  19. GWAS and transcriptome analysis reveal MADS26 involved in seed germination ability in maize.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Zanping HanCollege of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China; College of Agronomy, Henan University of Science and Technology, Luoyang, China.
Lixia KuCollege of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China.
Zhenzhen ZhangCollege of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China.
Jun ZhangCollege of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China.
Shulei GuoCollege of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China.
Haiying LiuCollege of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China.
Ruifang ZhaoCollege of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China.
Zhenzhen RenCollege of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China.
Liangkun ZhangCollege of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China.
Huihui SuCollege of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China.
Lei DongCollege of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China.
Yanhui ChenCollege of Agronomy, Synergetic Innovation Center of Henan Grain Crops and National Key Laboratory of wheat and Maize Crop Science, Henan Agricultural University, Zhengzhou, China.
Henan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

High seed vigor is important for agricultural production due to the associated potential for increased growth and productivity. However, a better understanding of the underlying molecular mechanisms is required because the genetic basis for seed vigor remains unknown. We used single-nucleotide polymorphism (SNP) markers to map quantitative trait loci (QTLs) for four seed vigor traits in two connected recombinant inbred line (RIL) maize populations under four treatment conditions during seed germination. Sixty-five QTLs distributed between the two populations were identified and a meta-analysis was used to integrate genetic maps. Sixty-one initially identified QTLs were integrated into 18 meta-QTLs (mQTLs). Initial QTLs with contribution to phenotypic variation values of R(2)>10% were integrated into mQTLs. Twenty-three candidate genes for association with seed vigor traits coincided with 13 mQTLs. The candidate genes had functions in the glycolytic pathway and in protein metabolism. QTLs with major effects (R(2)>10%) were identified under at least one treatment condition for mQTL2, mQTL3-2, and mQTL3-4. Candidate genes included a calcium-dependent protein kinase gene (302810918) involved in signal transduction that mapped in the mQTL3-2 interval associated with germination energy (GE) and germination percentage (GP), and an hsp20/alpha crystallin family protein gene (At5g51440) that mapped in the mQTL3-4 interval associated with GE and GP. Two initial QTLs with a major effect under at least two treatment conditions were identified for mQTL5-2. A cucumisin-like Ser protease gene (At5g67360) mapped in the mQTL5-2 interval associated with GP. The chromosome regions for mQTL2, mQTL3-2, mQTL3-4, and mQTL5-2 may be hot spots for QTLs related to seed vigor traits. The mQTLs and candidate genes identified in this study provide valuable information for the identification of additional quantitative trait genes.

Indexed as

Quantitative Trait, HeritableQuantitative Trait LociAgingChromosome MappingChromosomes, PlantGenetic LinkageGenetic MarkersGerminationHybrid VigorInbreedingPhenotypePolymorphism, Single NucleotideSeedsZea maysGenetic Markers

Identifiers

PMID24651614
PMCPMC3961396
OpenAlexW2049610548

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.