Evidence map›Paper›PMID 24651049›Full record

ReviewRNA biology2014

Riboregulators and the role of Hfq in photosynthetic bacteria.

Wolfgang R Hess, Bork A Berghoff, Annegret Wilde, Claudia Steglich, Gabriele Klug

Open access · bronzeAbstract readReview
In one paragraph

Review in RNA biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Molecular mechanism of enhanced ethanol tolerance associated withFrontiers in bioengineering and biotechnology · 2022
    Article
  6. Article
  7. Article
  8. Article
  9. Dual-Function RNAs.Microbiology spectrum · 2018
    Review
  10. Review
  11. Article
  12. Impact of bacterial sRNAs in stress responses.Biochemical Society transactions · 2017
    Review
  13. Article
  14. Regulatory RNAs in photosynthetic cyanobacteria.FEMS microbiology reviews · 2015
    Review
  15. Article
  16. Article
  17. Comparative analysis of the primary transcriptome of Synechocystis sp. PCC 6803.DNA research : an international journal for rapid publication of reports on genes and genomes · 2014
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Wolfgang R HessFaculty of Biology; Institute for Biology III; University of Freiburg; Freiburg, Germany.
Bork A BerghoffInstitute for Microbiology and Molecular Biology; University of Giessen; Giessen, Germany.
Annegret WildeFaculty of Biology; Institute for Biology III; University of Freiburg; Freiburg, Germany.
Claudia SteglichFaculty of Biology; Institute for Biology III; University of Freiburg; Freiburg, Germany.
Gabriele KlugInstitute for Microbiology and Molecular Biology; University of Giessen; Giessen, Germany.
University of Freiburg · DEFaculty (United Kingdom) · GBGiessen School of Theology · DEUniversity of Giessen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anoxygenic and oxygenic bacteria directly convert solar energy into biomass using photosynthesis. The formation and composition of photosynthetic complexes has to be tightly controlled in response to environmental conditions, as exposure to sunlight can be harmful due to the generation of reactive oxygen species and the damaging effects of UV irradiation. Therefore, photosynthetic bacteria are exposed to a particular set of regulatory challenges in addition to those that also affect other bacteria, requiring sophisticated regulatory systems. Indeed, hundreds of potential regulatory RNAs have been identified in photosynthetic model bacteria as well as antisense RNAs (asRNAs) of up to several kb in length that protect certain mRNAs from degradation. The trans-acting small non-coding RNAs (sRNAs), PcrZ and PsrR1, control pigment and photosystem biogenesis in Rhodobacter sphaeroides and cyanobacteria, respectively. The asRNAs IsrR and As1_flv4 act as negative regulators and the asRNAs PsbA2R and PsbA3R as positive effectors of photosynthesis gene expression in Synechocystis 6803.

Indexed as

Gene Expression Regulation, BacterialAdaptation, BiologicalBacteriaCyanobacteriaHost Factor 1 ProteinOxidative StressPhotosynthesisRNA, AntisenseRNA, BacterialRNA, Small UntranslatedHost Factor 1 ProteinRNA, AntisenseRNA, BacterialRNA, Small Untranslatedantisense transcriptioncyanobacteriadifferential RNA-seqgene expression regulationphotosynthesisα-proteobacteria

Identifiers

PMID24651049
PMCPMC4152350
OpenAlexW1982585577

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.