Evidence map›Paper›PMID 24648516›Full record

ArticleThe Journal of biological chemistry2014

A role for DNA polymerase θ in promoting replication through oxidative DNA lesion, thymine glycol, in human cells.

Jung-Hoon Yoon, Jayati Roy Choudhury, Jeseong Park, Satya Prakash, Louise Prakash

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Manipulating alternative end-joining alters carbon-ion beam-induced genome mutation profiles in Arabidopsis thaliana.DNA research : an international journal for rapid publication of reports on genes and genomes · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Multifaceted Nature of DNA Polymerase θ.International journal of molecular sciences · 2023
    Review
  11. Genome Protection by DNA Polymerase θ.Annual review of genetics · 2022
    Review
  12. Article
  13. Mitochondrial DNA Instability in Mammalian Cells.Antioxidants & redox signaling · 2022
    Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jung-Hoon YoonFrom the Department of Biochemistry and Molecular Biology, University of Texas Medical Branch at Galveston, Galveston, Texas 77555-1061.
Jayati Roy Choudhury
Jeseong Park
Satya Prakash
Louise Prakash
The University of Texas Medical Branch at Galveston · US

Funding

Synthetic Organic Chemistry CoreP30ES006676 · NIEHS · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI ELFERINK, CORNELIS JOHAN · 1995 to 2017
$21.7M
Translesion DNA synthesis in humansR01ES012411 · NIEHS · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI PRAKASH, LOUISE · 2003 to 2012
$3.6M
Genetic control of replication through DNA lesions in humans, and carcinogenesisR01ES020833 · NIEHS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI PRAKASH, SATYA · 2012 to 2016
$1.7M
NIEHS NIH HHS ES012411NIEHS NIH HHS ES020833NIEHS NIH HHS P30 ES006676NIEHS NIH HHS P30-ES06676NIEHS NIH HHS R01 ES012411NIEHS NIH HHS R01 ES020833
6 · The paper itself

Abstract

The biological functions of human DNA polymerase (pol) θ, an A family polymerase, have remained poorly defined. Here we identify a role of polθ in translesion synthesis (TLS) in human cells. We show that TLS through the thymine glycol (TG) lesion, the most common oxidation product of thymine, occurs via two alternative pathways, in one of which, polymerases κ and ζ function together and mediate error-free TLS, whereas in the other, polθ functions in an error-prone manner. Human polθ is comprised of an N-terminal ATPase/helicase domain, a large central domain, and a C-terminal polymerase domain; however, we find that only the C-terminal polymerase domain is required for TLS opposite TG in human cells. In contrast to TLS mediated by polκ and polζ, in which polζ would elongate the chain from the TG:A base pair formed by polκ action, the ability of polθ alone to carry out the nucleotide insertion step, as well as the subsequent extension step that presents a considerable impediment due to displacement of the 5' template base, suggests that the polθ active site can accommodate highly distorting DNA lesions.

Indexed as

Cell LineDNA-Directed DNA PolymeraseDNA Polymerase thetaDNA ReplicationFibroblastsHumansOxidation-ReductionProtein Structure, TertiaryThymineY-Family DNA PolymerasesDNA-Directed DNA PolymeraseDNA Polymerase thetaPOLK protein, humanThyminethymine glycolY-Family DNA PolymerasesDNADNA DamageDNA PolymeraseDNA Polymerase θDNA RepairDNA ReplicationLesion BypassThymine Glycol

Identifiers

PMID24648516
PMCPMC4036329
OpenAlexW2023052699

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.