Evidence map›Paper›PMID 24647645›Full record

ArticleLab on a chip2014

In vitro generation of colonic epithelium from primary cells guided by microstructures.

Yuli Wang, Asad A Ahmad, Christopher E Sims, Scott T Magness, Nancy L Allbritton

Abstract read
In one paragraph

Article in Lab on a chip, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 62 citations in OpenAlex.

  1. A simple, efficient technique to make colon crypt gels for 3D models.3D printing and additive manufacturing · 2025
    Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Extracellular Microenvironmental Control for Organoid Assembly.Tissue engineering. Part B, Reviews · 2022
    Review
  7. Review
  8. Article
  9. Review
  10. Tissue engineering. Part B, Reviews · 2020
    Review
  11. Article
  12. First-line treatment selection with organoids of anJournal of thoracic disease · 2020
    Review
  13. Review
  14. Review
  15. Advances and Current Challenges in IntestinalFrontiers in bioengineering and biotechnology · 2019
    Review
  16. Review
  17. Review
  18. A SIMPLE ASPECT RATIO DEPENDENT METHOD OF PATTERNING MICROWELLS FOR SELECTIVE CELL ATTACHMENT.Proceedings of the ... Design of Medical Devices Conference. Design of Medical Devices Conference · 2018
    Article
  19. Advancing Intestinal Organoid Technology Toward Regenerative Medicine.Cellular and molecular gastroenterology and hepatology · 2018
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yuli WangDepartment of Chemistry, University of North Carolina, Chapel Hill, NC 27599, USA. nlallbri@unc.edu.
Asad A Ahmad
Christopher E Sims
Scott T Magness
Nancy L Allbritton
University of North Carolina at Chapel Hill · USNorth Carolina State University · US

Funding

PILOT AND FEASIBILITY STUDIESP30DK034987 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ROBERT S. SANDLER · 1985 to 2026
$30.5M
Genetic Control of Intestinal Epithelial Stem Cell Maintenance & DifferentiationR01DK091427 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MAGNESS, SCOTT T · 2011 to 2015
$1.6M
Arrays for Cloning Growth Suppressed CellsR01EB012549 · NIBIB · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ALLBRITTON, NANCY L. · 2011 to 2013
$1.3M
Microengineered system for ex vivo culturing of intestinal cryptsR03EB013803 · NIBIB · UNIV OF NORTH CAROLINA CHAPEL HILL · PI WANG, YULI · 2011 to 2012
$148k
NIBIB NIH HHS EB012549NIBIB NIH HHS EB013803NIBIB NIH HHS R01 EB012549NIBIB NIH HHS R03 EB013803NIDDK NIH HHS DK034987NIDDK NIH HHS DK091427NIDDK NIH HHS P30 DK034987NIDDK NIH HHS R01 DK091427
6 · The paper itself

Abstract

The proliferative compartment of the colonic epithelium in vivo is located in the basal crypt where colonic stem cells and transit-amplifying cells reside and fuel the rapid renewal of non-proliferative epithelial cells as they migrate toward the gut lumen. To mimic this tissue polarity, microstructures composed of polydimethylsiloxane (PDMS) microwells and Matrigel micropockets were used to guide a combined 2-dimensional (2D) and 3-dimensional (3D) hybrid culture of primary crypts isolated from the murine colon. The 2D and 3D culture of crypts on a planar PDMS surface was first investigated in terms of cell proliferation and stem cell activity. 3D culture of crypts with overlaid Matrigel generated enclosed, but highly proliferative spheroids (termed colonoids). 2D culture of crypts produced a spreading monolayer of cells, which were non-proliferative. A combined 2D/3D hybrid culture was generated in a PDMS microwell platform on which crypts were loaded by centrifugation into microwells (diameter = 150 μm, depth = 150 μm) followed by addition of Matrigel that formed micropockets locking the crypts within the microwells. Embedded crypts first underwent 3D expansion inside the wells. After the cells filled the microwells, they migrated onto the surrounding surface forming a 2D monolayer in the array regions without Matrigel. This unique 2D/3D hybrid culture generated a continuous, millimeter-scale colonic epithelial tissue in vitro, which resembled the polarized architecture (i.e. distinct proliferative and non-proliferative zones) and geometry of the colonic epithelium in vivo. This work initiates the construction of a "colon-on-a-chip" using primary cells/tissues with the ultimate goal of producing the physiologic structure and organ-level function of the colon.

Indexed as

AnimalsCell Culture TechniquesCell ProliferationCell SeparationColonDimethylpolysiloxanesIntestinal MucosaMiceTissue Array AnalysisbaysilonDimethylpolysiloxanes

Identifiers

PMID24647645
PMCPMC4037563
OpenAlexW2127227914

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.