Evidence map›Paper›PMID 24644293›Full record

ArticleThe Journal of biological chemistry2014

A novel MitoTimer reporter gene for mitochondrial content, structure, stress, and damage in vivo.

Rhianna C Laker, Peng Xu, Karen A Ryall, Alyson Sujkowski, Brandon M Kenwood, Kristopher H Chain, Mei Zhang, Mary A Royal, Kyle L Hoehn, Monica Driscoll and 4 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 178 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
178citing papers in PubMed, 1 pooled it
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

178 citing papers in PubMed, 1 synthesis or guideline pooled it, 251 citations in OpenAlex.

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118 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Rhianna C LakerDepartments of Medicine, University of Virginia, Charlottesville, Virginia 22908; Center for Skeletal Muscle Research at the Robert M. Berne Cardiovascular Research Center, University of Virginia, Charlottesville, Virginia 22908.
Peng XuDepartments of Medicine, University of Virginia, Charlottesville, Virginia 22908; Center for Skeletal Muscle Research at the Robert M. Berne Cardiovascular Research Center, University of Virginia, Charlottesville, Virginia 22908.
Karen A RyallDepartments of Biomedical Engineering, University of Virginia, Charlottesville, Virginia 22908.
Alyson SujkowskiDepartment of Geriatric Medicine, University of Michigan Medical School, Ann Arbor, Michigan 48109.
Brandon M KenwoodDepartments of Pharmacology, University of Virginia, Charlottesville, Virginia 22908.
Kristopher H ChainCenter for Skeletal Muscle Research at the Robert M. Berne Cardiovascular Research Center, University of Virginia, Charlottesville, Virginia 22908; Departments of Biochemistry and Molecular Genetics, University of Virginia, Charlottesville, Virginia 22908.
Mei ZhangDepartments of Medicine, University of Virginia, Charlottesville, Virginia 22908; Center for Skeletal Muscle Research at the Robert M. Berne Cardiovascular Research Center, University of Virginia, Charlottesville, Virginia 22908.
Mary A RoyalDepartment of Molecular Biology and Biochemistry, Rutgers University, Piscataway, New Jersey 08854.
Kyle L HoehnDepartments of Pharmacology, University of Virginia, Charlottesville, Virginia 22908.
Monica DriscollDepartment of Molecular Biology and Biochemistry, Rutgers University, Piscataway, New Jersey 08854.
Paul N AdlerDepartments of Biology, University of Virginia, Charlottesville, Virginia 22908.
Robert J WessellsDepartment of Geriatric Medicine, University of Michigan Medical School, Ann Arbor, Michigan 48109.
Jeffrey J SaucermanDepartments of Biomedical Engineering, University of Virginia, Charlottesville, Virginia 22908.
Zhen YanDepartments of Medicine, University of Virginia, Charlottesville, Virginia 22908; Center for Skeletal Muscle Research at the Robert M. Berne Cardiovascular Research Center, University of Virginia, Charlottesville, Virginia 22908; Departments of Pharmacology, University of Virginia, Charlottesville, Virginia 22908; Departments of Molecular Physiology and Biological Physics, University of Virginia, Charlottesville, Virginia 22908. Electronic address: zhen.yan@virginia.edu.
University of Virginia · USRutgers, The State University of New Jersey · USUniversity of Michigan–Ann Arbor · US

Funding

TRAINING IN THE PHARMACOLOGICAL SCIENCEST32GM007055 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI LYNCH, KEVIN R. · 1985 to 2022
$7.2M
p38 MAPK a regulator of muscle contraction and functionR01AR050429 · NIAMS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI YAN, ZHEN · 2005 to 2022
$5.3M
Understanding the Exopher: A Novel Mechanism for Extrusion of Neurotoxic ContentsR01AG047101 · NIA · RUTGERS, THE STATE UNIV OF N.J. · PI DRISCOLL, MONICA A., GRANT, BARTH DEMIAN · 2013 to 2022
$4.2M
Mechanisms modulating the maintenance of structural integrity in individual agingR01AG046358 · NIA · RUTGERS, THE STATE UNIV OF N.J. · PI DRISCOLL, MONICA A. · 2013 to 2017
$1.5M
NIAMS NIH HHS AR050429NIAMS NIH HHS R01 AR050429NIA NIH HHS R01 AG046358NIA NIH HHS R01 AG047101NIGMS NIH HHS T32 GM007055
6 · The paper itself

Abstract

Mitochondrial dysfunction plays important roles in many diseases, but there is no satisfactory method to assess mitochondrial health in vivo. Here, we engineered a MitoTimer reporter gene from the existing Timer reporter gene. MitoTimer encodes a mitochondria-targeted green fluorescent protein when newly synthesized, which shifts irreversibly to red fluorescence when oxidized. Confocal microscopy confirmed targeting of the MitoTimer protein to mitochondria in cultured cells, Caenorhabditis elegans touch receptor neurons, Drosophila melanogaster heart and indirect flight muscle, and mouse skeletal muscle. A ratiometric algorithm revealed that conditions that cause mitochondrial stress led to a significant shift toward red fluorescence as well as accumulation of pure red fluorescent puncta of damaged mitochondria targeted for mitophagy. Long term voluntary exercise resulted in a significant fluorescence shift toward green, in mice and D. melanogaster, as well as significantly improved structure and increased content in mouse FDB muscle. In contrast, high-fat feeding in mice resulted in a significant shift toward red fluorescence and accumulation of pure red puncta in skeletal muscle, which were completely ameliorated by voluntary wheel running. Hence, MitoTimer allows for robust analysis of multiple parameters of mitochondrial health under both physiological and pathological conditions and will be highly useful for future research of mitochondrial health in multiple disciplines in vivo.

Indexed as

Genes, ReporterOxidative StressAnimalsCaenorhabditis elegansCell LineDrosophila melanogasterMaleMiceMice, Inbred C57BLMitochondriaPhysical Conditioning, AnimalSpectrometry, FluorescenceConfocal MicroscopyExerciseHigh-fat DietMitochondriaOxidative StressReporter GeneSkeletal Muscle

Identifiers

PMID24644293
PMCPMC4002107
OpenAlexW2037871836

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.