Evidence map›Paper›PMID 24644279›Full record

ArticleThe Journal of biological chemistry2014

Nuclear ARVCF protein binds splicing factors and contributes to the regulation of alternative splicing.

Ulrike Rappe, Tanja Schlechter, Moritz Aschoff, Agnes Hotz-Wagenblatt, Ilse Hofmann

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Functional roles of p120ctn family of proteins in central neurons.Seminars in cell & developmental biology · 2017
    Review
  10. Subunit NDUFV3 is present in two distinct isoforms in mammalian complex I.Biochimica et biophysica acta. Bioenergetics · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ulrike RappeFrom the Division of Vascular Oncology and Metastasis, German Cancer Research Center, DKFZ-ZMBH Alliance, 69120 Heidelberg, Germany.
Tanja Schlechter
Moritz Aschoff
Agnes Hotz-Wagenblatt
Ilse Hofmann
German Cancer Research Center · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The armadillo repeat protein ARVCF is a component of adherens junctions. Similar to related proteins, such as p120-catenin and β-catenin, with known signaling functions, localization studies indicate a cytoplasmic and a nuclear pool of ARVCF. We find that ARVCF interacts with different proteins involved in mRNA-processing: the splicing factor SRSF1 (SF2/ASF), the RNA helicase p68 (DDX5), and the heterogeneous nuclear ribonucleoprotein hnRNP H2. All three proteins bind to ARVCF in an RNA-independent manner. Furthermore, ARVCF occurs in large RNA-containing complexes that contain both spliced and unspliced mRNAs of housekeeping genes. By domain analysis, we show that interactions occur via the ARVCF C terminus. Overexpression of ARVCF, p68, SRSF1, and hnRNP H2 induces a significant increase in splicing activity of a reporter mRNA. Upon depletion of ARVCF followed by RNA sequence analysis, several alternatively spliced transcripts are significantly changed. Therefore, we conclude that nuclear ARVCF influences splicing of pre-mRNAs. We hypothesize that ARVCF is involved in alternative splicing, generating proteomic diversity, and its deregulation may contribute to diseased states, such as cancer and neurological disorders.

Indexed as

Alternative SplicingArmadillo Domain ProteinsBinding SitesBlotting, WesternCaco-2 CellsCell Adhesion MoleculesDEAD-box RNA HelicasesGene ExpressionGreen Fluorescent ProteinsHEK293 CellsHeterogeneous-Nuclear Ribonucleoprotein Group F-HHumansMicroscopy, ConfocalMutationNuclear ProteinsPhosphoproteinsArmadillo Domain ProteinsARVCF protein, humanCell Adhesion MoleculesDdx5 protein, humanDEAD-box RNA HelicasesGreen Fluorescent ProteinsHeterogeneous-Nuclear Ribonucleoprotein Group F-HHNRNPH2 protein, humanNuclear ProteinsPhosphoproteinsProtein IsoformsRNA-Binding ProteinsRNA, MessengerRNA PrecursorsSerine-Arginine Splicing FactorsAdherens JunctionAlternative SplicingArm Repeat ProteinCateninCell JunctionsMolecular Cell BiologyPost-transcriptional Gene Expression RegulationRibonuclear Protein (RNP)

Identifiers

PMID24644279
PMCPMC4007437
OpenAlexW1978229208

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.