Evidence map›Paper›PMID 24643020›Full record

ArticleRNA biology2014

Evolution of the miR199-214 cluster and vertebrate skeletal development.

Thomas Desvignes, Adam Contreras, John H Postlethwait

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 81 citations in OpenAlex.

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  12. Post-transcriptional tuning of FGF signaling mediates neural crest induction.Proceedings of the National Academy of Sciences of the United States of America · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Thomas DesvignesInstitute of Neuroscience; University of Oregon; Eugene, OR USA.
Adam ContrerasInstitute of Neuroscience; University of Oregon; Eugene, OR USA.
John H PostlethwaitInstitute of Neuroscience; University of Oregon; Eugene, OR USA.
Eugene Research Institute · US

Funding

Idenfication of miRNAs involved midfacial development and cleftingU01DE020076 · NIDCR · UNIVERSITY OF COLORADO DENVER · PI ARTINGER, KRISTIN, CLOUTHIER, DAVID E. · 2009 to 2013
$1.9M
Advancing the Scientific Potential of Transcriptomics in Aquatic ModelsR24OD011199 · OD · UNIVERSITY OF OREGON · PI CRESKO, WILLIAM A, POSTLETHWAIT, JOHN H. · 2012 to 2014
$1.8M
NICHD R25 Summer Research Program at the University of OregonR25HD070817 · NICHD · UNIVERSITY OF OREGON · PI EISEN, JUDITH S · 2011 to 2021
$1.1M
NICHD NIH HHS R25 HD070817NIDCR NIH HHS U01 DE020076NIDCR NIH HHS U01DE020076NIH HHS R24 OD011199
6 · The paper itself

Abstract

MicroRNA (miRs) are short non-coding RNAs that fine-tune the regulation of gene expression to coordinate a wide range of biological processes. MicroRNAs are transcribed from miR genes and primary miR transcripts are processed to approximately 22 nucleotide single strand mature forms that function as repressors of transcript translation when bound to the 3'UTR of protein coding transcripts in association with the RISC. Because of their role in the regulation of gene expression, miRs are essential players in development by acting on cell fate determination and progression toward cell differentiation. The miR199 and miR214 genes occupy an intronic cluster located on the opposite strand of the Dynamin3 gene. These miRNAs play major roles in a broad variety of developmental processes and diseases, including skeletal development and several types of cancer. In the work reported here, we first deciphered the origin of the miR199 and miR214 families by following evolution of miR paralogs and their host Dynamin paralogs. We then examined the expression patterns of miR199 and miR214 in developing zebrafish embryos and demonstrated their regulation through a common primary transcript. Results suggest an evolutionarily conserved regulation across vertebrate lineages. Our expression study showed predominant expression patterns for both miR in tissues surrounding developing craniofacial skeletal elements consistent with expression data in mouse and human, thus indicating a conserved role of miR199 and miR214 in vertebrate skeletogenesis.

Indexed as

Evolution, MolecularMultigene FamilyAnimalsBase SequenceBone and BonesGene Expression Regulation, DevelopmentalHumansMicroRNAsNucleic Acid ConformationOrganogenesisPhenotypePhylogenyVertebratesMicroRNAsdnm3dnm3osmicroRNAmiR199miR214miRNA evolutionskeletogenesisvertebrateszebrafish

Identifiers

PMID24643020
PMCPMC4075512
OpenAlexW2055894119

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.