Evidence map›Paper›PMID 24642956›Full record

ArticleScientific reports2014

Genome wide identification of fruitless targets suggests a role in upregulating genes important for neural circuit formation.

Sonja C Vernes

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.5field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
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  7. Sex-biased expression is associated with chromatin state inbioRxiv : the preprint server for biology · 2023
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  8. Review
  9. Review
  10. A non-coding indel polymorphism in theProceedings. Biological sciences · 2021
    Article
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  13. Investigation ofeLife · 2021
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  14. Article
  15. Article
  16. eLife · 2020
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  17. Article
  18. Layered roles ofeLife · 2020
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 3 countries.

Sonja C Vernes1] Research Institute of Molecular Pathology (IMP), Vienna, Austria [2] Language and Genetics Department, Max Planck Institute for Psycholinguistics & Donders Institute for Brain, Cognition and Behaviour, Radboud University, Nijmegen, The Netherlands.
Research Institute of Molecular Pathology · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The fruitless gene (fru) encodes a set of transcription factors (Fru) that display sexually dimorphic gene expression in the brain of the fruit-fly; Drosophila melanogaster. Behavioural studies have demonstrated that fru is essential for courtship behaviour in the male fly and is thought to act by directing the development of sex-specific neural circuitry that encodes this innate behavioural response. This study reports the identification of direct regulatory targets of the sexually dimorphic isoforms of the Fru protein using an in vitro model system. Genome wide binding sites were identified for each of the isoforms using Chromatin Immunoprecipitation coupled to deep sequencing (ChIP-Seq). Putative target genes were found to be involved in processes such as neurotransmission, ion-channel signalling and neuron development. All isoforms showed a significant bias towards genes located on the X-chromosome, which may reflect a specific role for Fru in regulating x-linked genes. Taken together with expression analysis carried out in Fru positive neurons specifically isolated from the male fly brain, it appears that the Fru protein acts as a transcriptional activator. Understanding the regulatory cascades induced by Fru will help to shed light on the molecular mechanisms that are important for specification of neural circuitry underlying complex behaviour.

Indexed as

GenomeTranscriptional ActivationAnimalsBinding SitesBrainChromosome MappingChromosomes, InsectCourtshipDrosophila melanogasterDrosophila ProteinsFemaleIon Channel GatingMaleMolecular Sequence AnnotationNerve NetNerve Tissue ProteinsDrosophila Proteinsfru protein, DrosophilaNerve Tissue ProteinsProtein IsoformsTranscription Factors

Identifiers

PMID24642956
PMCPMC3958720
OpenAlexW2033867386

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.