Evidence map›Paper›PMID 24642900›Full record

ArticlePloS one2014

High and low doses of ionizing radiation induce different secretome profiles in a human skin model.

Qibin Zhang, Melissa Matzke, Athena A Schepmoes, Ronald J Moore, Bobbie-Jo Webb-Robertson, Zeping Hu, Matthew E Monroe, Wei-Jun Qian, Richard D Smith, William F Morgan

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Proteomes · 2015
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Qibin ZhangBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Melissa MatzkeComputational Biology and Bioinformatics, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Athena A SchepmoesBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Ronald J MooreBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Bobbie-Jo Webb-RobertsonComputational Biology and Bioinformatics, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Zeping HuBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Matthew E MonroeBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Wei-Jun QianBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Richard D SmithBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
William F MorganBiological Sciences Division, Pacific Northwest National Laboratory, Richland, Washington, United States of America.
Pacific Northwest National Laboratory · US

Funding

WORKSHOP AND TRAINING ACTIVITIESP41RR018522 · NCRR · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI BELOV, MIKHAIL · 2003 to 2011
$25.1M
Equipment Supplement Request for a Research Resource for Ultra-sensitive High Throughput ProteomicsP41GM103493 · NIGMS · BATTELLE PACIFIC NORTHWEST LABORATORIES · PI SMITH, RICHARD D · 2012 to 2022
$22.6M
NCRR NIH HHS 5P41RR018522-10NCRR NIH HHS P41 RR018522NIGMS NIH HHS 8P41GM103493-10NIGMS NIH HHS P41 GM103493
6 · The paper itself

Abstract

It is postulated that secreted soluble factors are important contributors of bystander effect and adaptive responses observed in low dose ionizing radiation. Using multidimensional liquid chromatography-mass spectrometry based proteomics, we quantified the changes of skin tissue secretome--the proteins secreted from a full thickness, reconstituted 3-dimensional skin tissue model 48 hr after exposure to 3, 10 and 200 cGy of X-rays. Overall, 135 proteins showed statistical significant difference between the sham (0 cGy) and any of the irradiated groups (3, 10 or 200 cGy) on the basis of Dunnett adjusted t-test; among these, 97 proteins showed a trend of downregulation and 9 proteins showed a trend of upregulation with increasing radiation dose. In addition, there were 21 and 8 proteins observed to have irregular trends with the 10 cGy irradiated group either having the highest or the lowest level among all three radiated doses. Moreover, two proteins, carboxypeptidase E and ubiquitin carboxyl-terminal hydrolase isozyme L1 were sensitive to ionizing radiation, but relatively independent of radiation dose. Conversely, proteasome activator complex subunit 2 protein appeared to be sensitive to the dose of radiation, as rapid upregulation of this protein was observed when radiation doses were increased from 3, to 10 or 200 cGy. These results suggest that different mechanisms of action exist at the secretome level for low and high doses of ionizing radiation.

Indexed as

HumansModels, BiologicalProteomeSkinTissue Culture TechniquesX-RaysProteome

Identifiers

PMID24642900
PMCPMC3958549
OpenAlexW1978652471

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.