Evidence map›Paper›PMID 24642759›Full record

ArticlePhysiological genomics2014

Unique transcriptomic signature of omental adipose tissue in Ossabaw swine: a model of childhood obesity.

Ryan G Toedebusch, Michael D Roberts, Kevin D Wells, Joseph M Company, Kayla M Kanosky, Jaume Padilla, Nathan T Jenkins, James W Perfield, Jamal A Ibdah, Frank W Booth and 1 more

Abstract read
In one paragraph

Article in Physiological genomics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
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  4. Obesity Animal Models for Acupuncture and Related Therapy Research Studies.Evidence-based complementary and alternative medicine : eCAM · 2021
    Review
  5. Review
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  10. Microvascular insulin resistance in skeletal muscle and brain occurs early in the development of juvenile obesity in pigs.American journal of physiology. Regulatory, integrative and comparative physiology · 2018
    Article
  11. Article
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  13. Fat and carbohydrate content in the diet induces drastic changes in gene expression in young Göttingen minipigs.Mammalian genome : official journal of the International Mammalian Genome Society · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Ryan G ToedebuschBiomedical Sciences, University of Missouri, Columbia, Missouri;
Michael D RobertsBiomedical Sciences, University of Missouri, Columbia, Missouri;
Kevin D WellsAnimal Sciences, University of Missouri, Columbia, Missouri;
Joseph M CompanyBiomedical Sciences, University of Missouri, Columbia, Missouri;
Kayla M KanoskyInternal Medicine-Division of Gastroenterology and Hepatology, University of Missouri, Columbia, Missouri;
Jaume PadillaChild Health, University of Missouri, Columbia, Missouri; Nutrition and Exercise Physiology, University of Missouri, Columbia, Missouri; Dalton Cardiovascular Research Center, University of Missouri, Columbia, Missouri;
Nathan T JenkinsKinesiology, University of Georgia, Athens, Georgia.
James W PerfieldDepartment of Food Science, University of Missouri, Columbia, Missouri; Nutrition and Exercise Physiology, University of Missouri, Columbia, Missouri;
Jamal A IbdahInternal Medicine-Division of Gastroenterology and Hepatology, University of Missouri, Columbia, Missouri; Nutrition and Exercise Physiology, University of Missouri, Columbia, Missouri; Medical Pharmacology and Physiology, University of Missouri, Columbia, Missouri;
Frank W BoothBiomedical Sciences, University of Missouri, Columbia, Missouri; Dalton Cardiovascular Research Center, University of Missouri, Columbia, Missouri; Medical Pharmacology and Physiology, University of Missouri, Columbia, Missouri;
R Scott RectorInternal Medicine-Division of Gastroenterology and Hepatology, University of Missouri, Columbia, Missouri; Nutrition and Exercise Physiology, University of Missouri, Columbia, Missouri; Research Service, Harry S. Truman Memorial VA Medical Center, University of Missouri, Columbia, Missouri; and rectors@health.missouri.edu.
University of Missouri · USUniversity of Georgia · USHarry S. Truman Memorial Veterans' Hospital · USUniversity of Missouri Health System · US

Funding

PORCINE MODELS OF CORONARY ARTERY DISEASE IN DIABETESR24RR013223 · NCRR · UNIVERSITY OF MISSOURI-COLUMBIA · PI STUREK, MICHAEL · 1998 to 2007
$4.5M
EXERCISE, DIABETES, &CORONARY SMOOTH MUSCLE Ca2+R01HL062552 · NHLBI · UNIVERSITY OF MISSOURI-COLUMBIA · PI STUREK, MICHAEL · 1999 to 2013
$4.5M
NCRR NIH HHS RR-013223NHLBI NIH HHS HL-062552
6 · The paper itself

Abstract

To better understand the impact of childhood obesity on intra-abdominal adipose tissue phenotype, a complete transcriptomic analysis using deep RNA-sequencing (RNA-seq) was performed on omental adipose tissue (OMAT) obtained from lean and Western diet-induced obese juvenile Ossabaw swine. Obese animals had 88% greater body mass, 49% greater body fat content, and a 60% increase in OMAT adipocyte area (all P < 0.05) compared with lean pigs. RNA-seq revealed a 37% increase in the total transcript number in the OMAT of obese pigs. Ingenuity Pathway Analysis showed transcripts in obese OMAT were primarily enriched in the following categories: 1) development, 2) cellular function and maintenance, and 3) connective tissue development and function, while transcripts associated with RNA posttranslational modification, lipid metabolism, and small molecule biochemistry were reduced. DAVID and Gene Ontology analyses showed that many of the classically recognized gene pathways associated with adipose tissue dysfunction in obese adults including hypoxia, inflammation, angiogenesis were not altered in OMAT in our model. The current study indicates that obesity in juvenile Ossabaw swine is characterized by increases in overall OMAT transcript number and provides novel data describing early transcriptomic alterations that occur in response to excess caloric intake in visceral adipose tissue in a pig model of childhood obesity.

Indexed as

DietDisease Models, AnimalSwineAnimalsBase SequenceBody CompositionBody WeightComputational BiologyConnective TissueCytokinesDNA PrimersFemaleGene Expression ProfilingHigh-Throughput Nucleotide SequencingHumansImmunohistochemistryCytokinesDNA Primerschildhood obesitygene expressioninflammationRNA-seqtranscriptomevisceral adipose tissue

Identifiers

PMID24642759
PMCPMC4042183
OpenAlexW2095108217

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.