Evidence map›Paper›PMID 24641803›Full record

ArticleAnnals of the American Thoracic Society2014

Differential responses to rhinovirus- and influenza-associated pulmonary exacerbations in patients with cystic fibrosis.

Ixsy A Ramirez, Lindsay J Caverly, Lindsay L Caverly, Linda M Kalikin, Adam M Goldsmith, Toby C Lewis, David T Burke, John J LiPuma, Uma S Sajjan, Marc B Hershenson

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Annals of the American Thoracic Society, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Update on Human Rhinovirus and Coronavirus Infections.Seminars in respiratory and critical care medicine · 2016
    Review
  8. Interferon response of the cystic fibrosis bronchial epithelium to major and minor group rhinovirus infection.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2016
    Article
  9. Acute effects of viral respiratory tract infections on sputum bacterial density during CF pulmonary exacerbations.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2015
    Observational
  10. Article
  11. Host-microbe interactions in distal airways: relevance to chronic airway diseases.European respiratory review : an official journal of the European Respiratory Society · 2015
    Review
  12. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Ixsy A Ramirez1 Department of Pediatrics and Communicable Diseases.
Lindsay J Caverly
Lindsay L Caverly
Linda M Kalikin
Adam M Goldsmith
Toby C Lewis
David T Burke
John J LiPuma
Uma S Sajjan
Marc B Hershenson
University of Michigan · USCenter for Non-Communicable Diseases · PK

Funding

Advancing Child Health Through Cellular and Molecular BiologyK12HD028820 · NICHD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Donna M. Martin · 2002 to 2026
$9.2M
Rhinovirus and Airway Epithelial Cell ResponsesR01HL081420 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HERSHENSON, MARC B. · 2006 to 2014
$3.3M
The lung microbiota in cystic fibrosisRC1HL100809 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LI, JUN, LIPUMA, JOHN J · 2009 to 2010
$999k
NHLBI NIH HHS HL81420NHLBI NIH HHS R01 HL081420NHLBI NIH HHS RC1 HL100809NHLBI NIH HHS RC1-HL100809NICHD NIH HHS K12 HD028820
6 · The paper itself

Abstract

rationaleThe mechanism by which viruses cause exacerbations of chronic airway disease and the capacity of patients with cystic fibrosis (CF) to respond to viral infection are not precisely known.

objectivesTo determine the antiviral response to infection in patients with CF.

methodsSputum was collected from patients with CF with respiratory exacerbation. Viruses were detected in multiplex polymerase chain reaction (PCR)-based assays. Gene expression of 84 antiviral response genes was measured, using a focused quantitative PCR gene array. MEASUREMENTS AND MAIN

resultsWe examined 36 samples from 23 patients with respiratory exacerbation. Fourteen samples tested virus-positive and 22 virus-negative. When we compared exacerbations associated with rhinovirus (RV, n = 9) and influenza (n = 5) with virus-negative specimens, we found distinct patterns of antiviral gene expression. RV was associated with greater than twofold induction of five genes, including those encoding the monocyte-attracting chemokines CXCL10, CXCL11, and CXCL9. Influenza was associated with overexpression of 20 genes, including those encoding the cytokines tumor necrosis factor and IL-12; the kinases MEK, TBK-1, and STAT-1; the apoptosis proteins caspase-8 and caspase-10; the influenza double-stranded RNA receptor RIG-I and its downstream effector MAVS; and pyrin, an IFN-stimulated protein involved in influenza resistance.

conclusionsWe conclude that virus-induced exacerbations of CF are associated with immune responses tailored to specific infections. Influenza induced a more potent response consisting of inflammation, whereas RV infection had a pronounced effect on chemokine expression. As far as we are aware, this study is the first to compare specific responses to different viruses in live patients with chronic airway disease.

Indexed as

Disease ProgressionAdolescentAdultCase-Control StudiesCaspase 10Caspase 8Chemokine CXCL10Chemokine CXCL11Chemokine CXCL9Cohort StudiesCystic FibrosisCytoskeletal ProteinsDEAD Box Protein 58DEAD-box RNA HelicasesFemaleGene ExpressionCASP10 protein, humanCASP8 protein, humanCaspase 10Caspase 8Chemokine CXCL10Chemokine CXCL11Chemokine CXCL9CXCL10 protein, humanCXCL11 protein, humanCXCL9 protein, humanCytoskeletal ProteinsDEAD Box Protein 58DEAD-box RNA HelicasesInterleukin-12MEFV protein, humanProtein Serine-Threonine KinasesPyrinReceptors, ImmunologicRIGI protein, humanSTAT1 protein, humanSTAT1 Transcription FactorTBK1 protein, humanTumor Necrosis Factors

Identifiers

PMID24641803
PMCPMC4225796
OpenAlexW2114212659

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.