Evidence map›Paper›PMID 24641316›Full record

ArticleChemical research in toxicology2014

Metabolomic and genomic evidence for compromised bile acid homeostasis by senecionine, a hepatotoxic pyrrolizidine alkaloid.

Aizhen Xiong, Fan Yang, Lianxiang Fang, Li Yang, Yuqi He, Yu-Jui Yvonne Wan, Yvonne Yu-Jui Wan, Ying Xu, Meng Qi, Xiuli Wang and 3 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Chemical research in toxicology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 53 citations in OpenAlex.

  1. Pooled it
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  11. Role of liver sinusoidal endothelial cells in liver diseases.Nature reviews. Gastroenterology & hepatology · 2021
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4 · The record

Corrections and comments

  • Erratum issued
    Wan, Yvonne Yu-Jui [corrected to Wan, Yu-Jui Yvonne]
5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Aizhen XiongThe MOE Key Laboratory for Standardization of Chinese Medicines and The SATCM Key Laboratory for New Resources and Quality Evaluation of Chinese Medicines, Institute of Chinese Materia Medica, Shanghai University of Traditional Chinese Medicine , 1200 Cailun Road, Shanghai 201203, China.
Fan Yang
Lianxiang Fang
Li Yang
Yuqi He
Yu-Jui Yvonne Wan
Yvonne Yu-Jui Wan
Ying Xu
Meng Qi
Xiuli Wang
Kate Yu
Karl Wah-Keung Tsim
Zhengtao Wang
State Administration of Traditional Chinese Medicine of the People's Republic of China · CNHong Kong University of Science and Technology · HKUniversity of California Davis Medical Center · USWaters (United States) · US

Funding

The Role of Probiotic Bifidobacteria and Bile Acid Metabolism in CarcinogenesisU01CA179582 · NCI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI MILLS, DAVID ANDREW, SLUPSKY, CAROLYN · 2014 to 2018
$2.8M
NCI NIH HHS U01 CA179582
6 · The paper itself

Abstract

Pyrrolizidine alkaloids (PAs) are among the most hepatotoxic natural products that produce irreversible injury to humans via the consumption of herbal medicine and honey, and through tea preparation. Toxicity and death caused by PA exposure have been reported worldwide. Metabolomics and genomics provide scientific and systematic views of a living organism and have become powerful techniques for toxicology research. In this study, senecionine hepatotoxicity on rats was determined via a combination of metabolomic and genomic analyses. From the global analysis generated from two omics data, the compromised bile acid homeostasis in vivo was innovatively demonstrated and confirmed. Serum profiling of bile acids was altered with significantly elevated conjugated bile acids after senecionine exposure, which was in accordance with toxicity. Similarly, the hepatic mRNA levels of several key genes associated with bile acid metabolism were significantly changed. This process included cholesterol 7-α hydroxylase, bile acid CoA-amino acid N-acetyltransferase, sodium taurocholate cotransporting polypeptide, organic anion-transporting polypeptides, and multidrug-resistance-associated protein 3. In conclusion, a cross-omics study provides a comprehensive analysis method for studying the toxicity caused by senecionine, which is a hepatotoxic PA. Moreover, the change in bile acid metabolism and the respective transporters may provide a new PA toxicity mechanism.

Indexed as

AnimalsBile Acids and SaltsGene Expression RegulationGenomicsLiverMaleMetabolomicsPyrrolizidine AlkaloidsRatsRats, Sprague-DawleyRNA, MessengerBile Acids and SaltsPyrrolizidine AlkaloidsRNA, Messengersenecionine

Identifiers

PMID24641316
PMCPMC7229698
OpenAlexW2334568976

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.