Evidence map›Paper›PMID 24639670›Full record

ArticleFrontiers in microbiology2014

Exploring the role of CheA3 in Desulfovibrio vulgaris Hildenborough motility.

Jayashree Ray, Kimberly L Keller, Michela Catena, Thomas R Juba, Marcin Zemla, Lara Rajeev, Bernhard Knierim, Grant M Zane, Jarrod J Robertson, Manfred Auer and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Diversity of bacterial chemosensory systems.Current opinion in microbiology · 2021
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Jayashree RayPhysical Biosciences Division, Lawrence Berkeley National Laboratory Berkeley, CA, USA.
Kimberly L KellerBiochemistry Division, University of Missouri Columbia, MO, USA.
Michela CatenaPhysical Biosciences Division, Lawrence Berkeley National Laboratory Berkeley, CA, USA.
Thomas R JubaBiochemistry Division, University of Missouri Columbia, MO, USA.
Marcin ZemlaLife Sciences Division, Lawrence Berkeley National Laboratory Berkeley, CA, USA.
Lara RajeevPhysical Biosciences Division, Lawrence Berkeley National Laboratory Berkeley, CA, USA.
Bernhard KnierimLife Sciences Division, Lawrence Berkeley National Laboratory Berkeley, CA, USA.
Grant M ZaneBiochemistry Division, University of Missouri Columbia, MO, USA.
Jarrod J RobertsonBiochemistry Division, University of Missouri Columbia, MO, USA.
Manfred AuerLife Sciences Division, Lawrence Berkeley National Laboratory Berkeley, CA, USA.
Judy D WallBiochemistry Division, University of Missouri Columbia, MO, USA.
Aindrila MukhopadhyayPhysical Biosciences Division, Lawrence Berkeley National Laboratory Berkeley, CA, USA.
Lawrence Berkeley National Laboratory · USUniversity of Missouri · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sulfate-reducing bacteria such as Desulfovibrio vulgaris Hildenborough are often found in environments with limiting growth nutrients. Using lactate as the electron donor and carbon source, and sulfate as the electron acceptor, wild type D. vulgaris shows motility on soft agar plates. We evaluated this phenotype with mutants resulting from insertional inactivation of genes potentially related to motility. Our study revealed that the cheA3 (DVU2072) kinase mutant was impaired in the ability to form motility halos. Insertions in two other cheA loci did not exhibit a loss in this phenotype. The cheA3 mutant was also non-motile in capillary assays. Complementation with a plasmid-borne copy of cheA3 restores wild type phenotypes. The cheA3 mutant displayed a flagellum as observed by electron microscopy, grew normally in liquid medium, and was motile in wet mounts. In the growth conditions used, the D. vulgaris ΔfliA mutant (DVU3229) for FliA, predicted to regulate flagella-related genes including cheA3, was defective both in flagellum formation and in forming the motility halos. In contrast, a deletion of the flp gene (DVU2116) encoding a pilin-related protein was similar to wild type. We conclude that wild type D. vulgaris forms motility halos on solid media that are mediated by flagella-related mechanisms via the CheA3 kinase. The conditions under which the CheA1 (DVU1594) and CheA2 (DVU1960) kinase function remain to be explored.

Indexed as

cheAelectron acceptormotilityPalleroni chamber assaysensor histidine kinasesoft agar plate assay

Identifiers

PMID24639670
PMCPMC3944678
OpenAlexW2050149623

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.