Evidence map›Paper›PMID 24639505›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Using ancient DNA to study the origins and dispersal of ancestral Polynesian chickens across the Pacific.

Vicki A Thomson, Ophélie Lebrasseur, Jeremy J Austin, Terry L Hunt, David A Burney, Tim Denham, Nicolas J Rawlence, Jamie R Wood, Jaime Gongora, Linus Girdland Flink and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
77.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 142 citations in OpenAlex.

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  7. Implications of anomalous relative sea-level rise for the peopling of Remote Oceania.Proceedings of the National Academy of Sciences of the United States of America · 2022
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  19. Phylogenetic Studies on Red Junglefowl (The journal of poultry science · 2019
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors at 10 institutions in 4 countries.

Vicki A ThomsonAustralian Centre for Ancient DNA, School of Earth and Environmental Sciences, University of Adelaide, Adelaide, SA 5005, Australia.
Ophélie Lebrasseur
Jeremy J Austin
Terry L Hunt
David A Burney
Tim Denham
Nicolas J Rawlence
Jamie R Wood
Jaime Gongora
Linus Girdland Flink
Anna Linderholm
Keith Dobney
Greger Larson
Alan Cooper
Durham University · GBThe University of Adelaide · AUAllan Wilson Centre · NZAustralian National University · AUManaaki Whenua – Landcare Research · NZMuseums Victoria · AUNational Tropical Botanical Garden · USThe University of Sydney · AUUniversity of Aberdeen · GBUniversity of Oregon · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The human colonization of Remote Oceania remains one of the great feats of exploration in history, proceeding east from Asia across the vast expanse of the Pacific Ocean. Human commensal and domesticated species were widely transported as part of this diaspora, possibly as far as South America. We sequenced mitochondrial control region DNA from 122 modern and 22 ancient chicken specimens from Polynesia and Island Southeast Asia and used these together with Bayesian modeling methods to examine the human dispersal of chickens across this area. We show that specific techniques are essential to remove contaminating modern DNA from experiments, which appear to have impacted previous studies of Pacific chickens. In contrast to previous reports, we find that all ancient specimens and a high proportion of the modern chickens possess a group of unique, closely related haplotypes found only in the Pacific. This group of haplotypes appears to represent the authentic founding mitochondrial DNA chicken lineages transported across the Pacific, and allows the early dispersal of chickens across Micronesia and Polynesia to be modeled. Importantly, chickens carrying this genetic signature persist on several Pacific islands at high frequencies, suggesting that the original Polynesian chicken lineages may still survive. No early South American chicken samples have been detected with the diagnostic Polynesian mtDNA haplotypes, arguing against reports that chickens provide evidence of Polynesian contact with pre-European South America. Two modern specimens from the Philippines carry haplotypes similar to the ancient Pacific samples, providing clues about a potential homeland for the Polynesian chicken.

Indexed as

Animal MigrationAnimalsBase PairingBayes TheoremChickensDNAGenome, MitochondrialGeographyHaplotypesHumansLocus Control RegionMolecular Sequence DataPacific OceanPhylogenyPolynesiaTime FactorsDNAarchaeologyLapitamigrationPacific colonizationphylogeography

Identifiers

PMID24639505
PMCPMC3977275
OpenAlexW2081907310

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.