Evidence map›Paper›PMID 24639500›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2014

Single-molecule spectroscopy reveals polymer effects of disordered proteins in crowded environments.

Andrea Soranno, Iwo Koenig, Madeleine B Borgia, Hagen Hofmann, Franziska Zosel, Daniel Nettels, Benjamin Schuler

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 120 papers.

0numbers the graph read from it
0cells of the map it votes in
120citing papers in PubMed
9.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

120 citing papers in PubMed, 253 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Residue-level mapping of crowding effects on protein phase separation.Protein science : a publication of the Protein Society · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. A coarse-grained model for disordered proteins under crowded conditions.Protein science : a publication of the Protein Society · 2025
    Article
  11. PEG-mCherry interactions beyond classical macromolecular crowding.Protein science : a publication of the Protein Society · 2025
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

60 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Andrea SorannoDepartment of Biochemistry, University of Zurich, 8057 Zurich, Switzerland.
Iwo Koenig
Madeleine B Borgia
Hagen Hofmann
Franziska Zosel
Daniel Nettels
Benjamin Schuler
University of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intrinsically disordered proteins (IDPs) are involved in a wide range of regulatory processes in the cell. Owing to their flexibility, their conformations are expected to be particularly sensitive to the crowded cellular environment. Here we use single-molecule Förster resonance energy transfer to quantify the effect of crowding as mimicked by commonly used biocompatible polymers. We observe a compaction of IDPs not only with increasing concentration, but also with increasing size of the crowding agents, at variance with the predictions from scaled-particle theory, the prevalent paradigm in the field. However, the observed behavior can be explained quantitatively if the polymeric nature of both the IDPs and the crowding molecules is taken into account explicitly. Our results suggest that excluded volume interactions between overlapping biopolymers and the resulting criticality of the system can be essential contributions to the physics governing the crowded cellular milieu.

Indexed as

Amino Acid SequenceBiopolymersFluorescence Resonance Energy TransferHydrophobic and Hydrophilic InteractionsIntrinsically Disordered ProteinsMacromolecular SubstancesMolecular WeightProtein BindingSolutionsSpectrum AnalysisBiopolymersIntrinsically Disordered ProteinsMacromolecular SubstancesSolutionsexcluded volume screeningFlory–Huggins theorysingle-molecule FRETunfolded state collapse

Identifiers

PMID24639500
PMCPMC3977265
OpenAlexW2056698085

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.