Evidence map›Paper›PMID 24638978›Full record

ArticlePlant cell reports2014

Copper-mediated genotoxic stress is attenuated by the overexpression of the DNA repair gene MtTdp2α (tyrosyl-DNA phosphodiesterase 2) in Medicago truncatula plants.

Matteo Faè, Alma Balestrazzi, Massimo Confalonieri, Mattia Donà, Anca Macovei, Alberto Valassi, Giorgio Giraffa, Daniela Carbonera

Abstract read
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In one paragraph

Article in Plant cell reports, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Review
  3. Recent advances in physiological and molecular mechanisms of heavy metal accumulation in plants.Environmental science and pollution research international · 2021
    Review
  4. Plant Recovery after Metal Stress-A Review.Plants (Basel, Switzerland) · 2021
    Review
  5. CRISPR/Cas9-Mediated Targeted Mutagenesis ofFrontiers in plant science · 2021
    Article
  6. Article
  7. DNA- and DNA-Protein-Crosslink Repair in Plants.International journal of molecular sciences · 2019
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Review
  15. Review
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Matteo FaèDipartimento di Biologia e Biotecnologie 'L. Spallanzani', Via Ferrata 9, 27100, Pavia, Italy.
Alma Balestrazzi
Massimo Confalonieri
Mattia Donà
Anca Macovei
Alberto Valassi
Giorgio Giraffa
Daniela Carbonera
Foraggere e Lattiero Casearie · ITGregor Mendel Institute of Molecular Plant Biology · ATInternational Rice Research Institute · PH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageOur study highlights the use of the DNA repair gene MtTdp2α as a tool for improving the plant response to heavy metal stress. Tyrosyl-DNA phosphodiesterase 2 (Tdp2), involved in the removal of DNA topoisomerase II-mediated DNA damage and cell proliferation/differentiation signalling in animal cells, is still poorly characterised in plants. The Medicago truncatula lines Tdp2α-13c and Tdp2α-28 overexpressing the MtTdp2α gene and control (CTRL) line were exposed to 0.2 mM CuCl2. The DNA diffusion assay revealed a significant reduction in the percentage of necrosis caused by copper in the aerial parts of the Tdp2α-13c and Tdp2α-28 plants while neutral single cell gel electrophoresis highlighted a significant decrease in double strand breaks (DSBs), compared to CTRL. In the copper-treated Tdp2α-13c and Tdp2α-28 lines there was up-regulation (up to 4.0-fold) of genes encoding the α and β isoforms of Tyrosyl-DNA phosphodiesterase 1, indicating the requirement for Tdp1 function in the response to heavy metals. As for DSB sensing, the MtMRE11, MtRAD50 and MtNBS1 genes were also significantly up-regulated (up to 2.3-fold) in the MtTdp2α-overexpressing plants grown under physiological conditions, compared to CTRL line, and then further stimulated in response to copper. The basal antioxidant machinery was always activated in all the tested lines, as indicated by the concomitant up-regulation of MtcytSOD and MtcpSOD genes (cytosolic and chloroplastic Superoxide Dismutase), and MtMT2 (type 2 metallothionein) gene. The role of MtTdp2α gene in enhancing the plant response to genotoxic injury under heavy metal stress is discussed.

Indexed as

AntioxidantsCell DeathCell SurvivalChlorophyllCopperDNA Breaks, Double-StrandedDNA DamageDNA RepairGene Expression Regulation, PlantMedicago truncatulaMetals, HeavyPhosphoric Diester HydrolasesSuperoxide DismutaseAntioxidantsChlorophyllCoppercupric chlorideMetals, HeavyPhosphoric Diester HydrolasesSuperoxide Dismutasetyrosyl-DNA phosphodiesterase

Identifiers

PMID24638978
OpenAlexW2079579300

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.