Evidence map›Paper›PMID 24637356›Full record

ArticleJournal of visualized experiments : JoVE2014

Monitoring changes in membrane polarity, membrane integrity, and intracellular ion concentrations in Streptococcus pneumoniae using fluorescent dyes.

Emily A Clementi, Laura R Marks, Hazeline Roche-Håkansson, Anders P Håkansson

Open access · bronzeAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 41 citations in OpenAlex.

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  18. Development of Bactericidal Peptides against Multidrug-ResistantInternational journal of molecular sciences · 2022
    Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Emily A ClementiDepartment of Microbiology and Immunology, University at Buffalo, State University of New York.
Laura R MarksDepartment of Microbiology and Immunology, University at Buffalo, State University of New York.
Hazeline Roche-HåkanssonDepartment of Microbiology and Immunology, University at Buffalo, State University of New York.
Anders P HåkanssonDepartment of Microbiology and Immunology, University at Buffalo, State University of New York; Witebsky Center for Microbial Pathogenesis and Immunology, University at Buffalo, State University of New York; New York State Center of Excellence in Bioinformatics and Life Sciences, University at Buffalo, State University of New York; andersh@buffalo.edu.
University at Buffalo, State University of New York · US

Funding

Anesthesiology Research Training ProgramT32GM099607 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI KNIGHT III, PAUL R · 2012 to 2021
$1.8M
The effect of a protein-lipid complex from human milk against pneumococcal otitisF31DC011218 · NIDCD · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI CLEMENTI, EMILY · 2010 to 2013
$68k
NIDCD NIH HHS F31 DC011218NIDCD NIH HHS F31DC011218NIGMS NIH HHS T32 GM099607
6 · The paper itself

Abstract

Membrane depolarization and ion fluxes are events that have been studied extensively in biological systems due to their ability to profoundly impact cellular functions, including energetics and signal transductions. While both fluorescent and electrophysiological methods, including electrode usage and patch-clamping, have been well developed for measuring these events in eukaryotic cells, methodology for measuring similar events in microorganisms have proven more challenging to develop given their small size in combination with the more complex outer surface of bacteria shielding the membrane. During our studies of death-initiation in Streptococcus pneumoniae (pneumococcus), we wanted to elucidate the role of membrane events, including changes in polarity, integrity, and intracellular ion concentrations. Searching the literature, we found that very few studies exist. Other investigators had monitored radioisotope uptake or equilibrium to measure ion fluxes and membrane potential and a limited number of studies, mostly in Gram-negative organisms, had seen some success using carbocyanine or oxonol fluorescent dyes to measure membrane potential, or loading bacteria with cell-permeant acetoxymethyl (AM) ester versions of ion-sensitive fluorescent indicator dyes. We therefore established and optimized protocols for measuring membrane potential, rupture, and ion-transport in the Gram-positive organism S. pneumoniae. We developed protocols using the bis-oxonol dye DiBAC4(3) and the cell-impermeant dye propidium iodide to measure membrane depolarization and rupture, respectively, as well as methods to optimally load the pneumococci with the AM esters of the ratiometric dyes Fura-2, PBFI, and BCECF to detect changes in intracellular concentrations of Ca(2+), K(+), and H(+), respectively, using a fluorescence-detection plate reader. These protocols are the first of their kind for the pneumococcus and the majority of these dyes have not been used in any other bacterial species. Though our protocols have been optimized for S. pneumoniae, we believe these approaches should form an excellent starting-point for similar studies in other bacterial species.

Indexed as

CalciumCationsCell MembraneCell PolarityFluorescent DyesHydrogenIonophoresMembrane PotentialsOptical ImagingPotassiumStreptococcus pneumoniaeCalciumCationsFluorescent DyesHydrogenIonophoresPotassium

Identifiers

PMID24637356
PMCPMC4124894
OpenAlexW2046312396

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.