Evidence map›Paper›PMID 24635445›Full record

ArticleThe Biochemical journal2014

Myoplasmic resting Ca2+ regulation by ryanodine receptors is under the control of a novel Ca2+-binding region of the receptor.

Yanyi Chen, Shenghui Xue, Juan Zou, Jose R Lopez, Jenny J Yang, Claudio F Perez

Open access · hybridAbstract read
In one paragraph

Article in The Biochemical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. BioMed research international · 2019
    Trial
  2. Article
  3. Interplay between MgNature communications · 2024
    Article
  4. Article
  5. Article
  6. Design of Calcium-Binding Proteins to Sense Calcium.Molecules (Basel, Switzerland) · 2020
    Review
  7. Article
  8. A guide to the 3D structure of the ryanodine receptor type 1 by cryoEM.Protein science : a publication of the Protein Society · 2017
    Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Yanyi Chen*Department of Chemistry, Center for Diagnostics and Therapeutics, Georgia State University, 50 Decatur Street, NSC 552, Atlanta, GA 30303, U.S.A.
Shenghui Xue*Department of Chemistry, Center for Diagnostics and Therapeutics, Georgia State University, 50 Decatur Street, NSC 552, Atlanta, GA 30303, U.S.A.
Juan Zou*Department of Chemistry, Center for Diagnostics and Therapeutics, Georgia State University, 50 Decatur Street, NSC 552, Atlanta, GA 30303, U.S.A.
Jose R Lopez†Department of Molecular Biosciences, School of Veterinary Medicine, University of California, Davis, 1089 Veterinary Medicine Drive, Davis, CA 95616, U.S.A.
Jenny J Yang*Department of Chemistry, Center for Diagnostics and Therapeutics, Georgia State University, 50 Decatur Street, NSC 552, Atlanta, GA 30303, U.S.A.
Claudio F Perez‡Department of Anesthesiology, Perioperative and Pain Medicine, Brigham and Women's Hospital, Harvard Medical School, 20 Shattuck Street, Boston, MA 02115, U.S.A.
Georgia State University · USBrigham and Women's Hospital · USUniversity of California, Davis · US

Funding

Designing Magnetic Resonance Protein-based Contrast Agents with High RelaxivityR01EB007268 · NIBIB · GEORGIA STATE UNIVERSITY · PI YANG, JENNY J. · 2007 to 2015
$3.1M
Structural Biology of receptor-mediated extracellular calcium signalingR01GM081749 · NIGMS · GEORGIA STATE UNIVERSITY · PI YANG, JENNY J. · 2007 to 2011
$1.2M
Structural/functional interaction between RyR1 and DHPR alpha1s and Beta1a isoforK01AR054818 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI PEREZ, CLAUDIO F · 2008 to 2012
$655k
NIAMS NIH HHS 5K01AR054818NIAMS NIH HHS K01 AR054818NIBIB NIH HHS EB007268NIGMS NIH HHS GM081749
6 · The paper itself

Abstract

Passive SR (sarcoplasmic reticulum) Ca2+ leak through the RyR (ryanodine receptor) plays a critical role in the mechanisms that regulate [Ca2+]rest (intracellular resting myoplasmic free Ca2+ concentration) in muscle. This process appears to be isoform-specific as expression of either RyR1 or RyR3 confers on myotubes different [Ca2+]rest. Using chimaeric RyR3-RyR1 receptors expressed in dyspedic myotubes, we show that isoform-dependent regulation of [Ca2+]rest is primarily defined by a small region of the receptor encompassing amino acids 3770-4007 of RyR1 (amino acids 3620-3859 of RyR3) named as the CLR (Ca2+ leak regulatory) region. [Ca2+]rest regulation by the CLR region was associated with alteration of RyRs' Ca2+-activation profile and changes in SR Ca2+-leak rates. Biochemical analysis using Tb3+-binding assays and intrinsic tryptophan fluorescence spectroscopy of purified CLR domains revealed that this determinant of RyRs holds a novel Ca2+-binding domain with conformational properties that are distinctive to each isoform. Our data suggest that the CLR region provides channels with unique functional properties that modulate the rate of passive SR Ca2+ leak and confer on RyR1 and RyR3 distinctive [Ca2+]rest regulatory properties. The identification of a new Ca2+-binding domain of RyRs with a key modulatory role in [Ca2+]rest regulation provides new insights into Ca2+-mediated regulation of RyRs.

Indexed as

AnimalsCalciumMuscle Fibers, SkeletalProtein ConformationProtein IsoformsRyanodine Receptor Calcium Release ChannelSarcoplasmic ReticulumCalciumProtein IsoformsRyanodine Receptor Calcium Release Channel

Identifiers

PMID24635445
PMCPMC4019983
OpenAlexW2112994806

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.