Evidence map›Paper›PMID 24634607›Full record

ArticleComputing in science & engineering2012

A Pipeline Software Architecture for NMR Spectrum Data Translation.

Heidi J C Ellis, Gerard Weatherby, Ronald J Nowling, Jay Vyas, Matthew Fenwick, Michael R Gryk

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Computing in science & engineering, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Heidi J C EllisDepartment of Computer Science and Information Technology, Western New England University, 1215 Wilbraham Road Springfield, MA 01119-2684, ph: 413-782-1748, fax: 413-796-2118.
Gerard WeatherbyDepartment of Molecular, Microbial and Structural Biology, University of Connecticut Health Center, 263 Farmington Avenue, Farmington, Connecticut 06030-3305, ph: 860-679-8759, fax: 860-679-3408.
Ronald J Nowling429 Napoleon St., South Bend, IN 46617, ph: 954-496-2314.
Jay VyasDepartment of Molecular, Microbial and Structural Biology, University of Connecticut Health Center, 263 Farmington Avenue, Farmington, Connecticut 06030-3305, ph: 860-679-8759, fax: 860-679-3408.
Matthew FenwickDepartment of Molecular, Microbial and Structural Biology, University of Connecticut Health Center, 263 Farmington Avenue, Farmington, Connecticut 06030-3305, ph: 860-679-8759, fax: 860-679-3408.
Michael R GrykDepartment of Molecular, Microbial and Structural Biology, University of Connecticut Health Center, 263 Farmington Avenue, Farmington, Connecticut 06030-3305, ph: 860-679-4785, fax: 860-679-3408.

Funding

CONNJUR: A Software Integration Platform for Biomolecular NMR SpectroscopyR01GM083072 · NIGMS · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI GRYK, MICHAEL R · 2009 to 2012
$1.2M
Database-driven software for biological NMR analysisR21EB001496 · NIBIB · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI GRYK, MICHAEL R · 2005 to 2006
$327k
NIBIB NIH HHS R21 EB001496NIGMS NIH HHS R01 GM083072
6 · The paper itself

Abstract

The problem of formatting data so that it conforms to the required input for scientific data processing tools pervades scientific computing. The CONNecticut Joint University Research Group (CONNJUR) has developed a data translation tool based on a pipeline architecture that partially solves this problem. The CONNJUR Spectrum Translator supports data format translation for experiments that use Nuclear Magnetic Resonance to determine the structure of large protein molecules.

Indexed as

Computer Applications: J.3.a Biology and geneticsData: E.m Miscellaneous

Identifiers

PMID24634607
PMCPMC3953461

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.