Evidence map›Paper›PMID 24633176›Full record

ArticlePloS one2014

High content image analysis identifies novel regulators of synaptogenesis in a high-throughput RNAi screen of primary neurons.

Thomas J F Nieland, David J Logan, Jessica Saulnier, Daniel Lam, Caroline Johnson, David E Root, Anne E Carpenter, Bernardo L Sabatini

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
7.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 48 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Thomas J F NielandStanley Center for Psychiatric Research, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, United States of America.
David J LoganImaging Platform at the Broad Institute of Harvard and MIT, Cambridge, Massachusetts, United States of America.
Jessica SaulnierHoward Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts, United States of America.
Daniel LamRNAi Platform, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, United States of America.
Caroline JohnsonHoward Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts, United States of America.
David E RootRNAi Platform, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, United States of America.
Anne E CarpenterImaging Platform at the Broad Institute of Harvard and MIT, Cambridge, Massachusetts, United States of America.
Bernardo L SabatiniHoward Hughes Medical Institute, Harvard Medical School, Boston, Massachusetts, United States of America.
Broad Institute · USHarvard University · US

Funding

Continued Development of CellProfiler Cell Image Analysis SoftwareR01GM089652 · NIGMS · BROAD INSTITUTE, INC. · PI CARPENTER, ANNE E. · 2010 to 2016
$3.7M
NIGMS NIH HHS R01 GM089652NIMH NIH HHS MH095096
6 · The paper itself

Abstract

The formation of synapses, the specialized points of chemical communication between neurons, is a highly regulated developmental process fundamental to establishing normal brain circuitry. Perturbations of synapse formation and function causally contribute to human developmental and degenerative neuropsychiatric disorders, such as Alzheimer's disease, intellectual disability, and autism spectrum disorders. Many genes controlling synaptogenesis have been identified, but lack of facile experimental systems has made systematic discovery of regulators of synaptogenesis challenging. Thus, we created a high-throughput platform to study excitatory and inhibitory synapse development in primary neuronal cultures and used a lentiviral RNA interference library to identify novel regulators of synapse formation. This methodology is broadly applicable for high-throughput screening of genes and drugs that may rescue or improve synaptic dysfunction associated with cognitive function and neurological disorders.

Indexed as

High-Throughput Screening AssaysMicroscopy, FluorescenceRNA InterferenceAlgorithmsAnimalsAutomation, LaboratoryGene Expression RegulationMiceNeuronsRNA, Small InterferingSynapsesRNA, Small Interfering

Identifiers

PMID24633176
PMCPMC3954765
OpenAlexW1995157027

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.