Evidence map›Paper›PMID 24633157›Full record

ArticleNature genetics2014

Recurrent PTPRB and PLCG1 mutations in angiosarcoma.

Sam Behjati, Patrick S Tarpey, Helen Sheldon, Inigo Martincorena, Peter Van Loo, Gunes Gundem, David C Wedge, Manasa Ramakrishna, Susanna L Cooke, Nischalan Pillay and 40 more

Open access · greenAbstract read
In one paragraph

Article in Nature genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 169 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
169citing papers in PubMed, 2 pooled it
14.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

169 citing papers in PubMed, 2 syntheses or guidelines pooled it, 312 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Trial
  4. Trial
  5. Primary cardiac angiosarcoma: From pathogenesis to therapeutic strategies.Medical oncology (Northwood, London, England) · 2026
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109 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

50 authors at 11 institutions in 6 countries.

Sam Behjati *Cancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Patrick S Tarpey *Cancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Helen Sheldon *The Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, OX3 9DS, UK.
Inigo MartincorenaCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Peter Van LooCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Gunes GundemCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
David C WedgeCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Manasa RamakrishnaCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Susanna L CookeCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Nischalan PillayHistopathology, Royal National Orthopaedic Hospital NHS Trust, Stanmore, Middlesex, HA7 4LP, UK.
Hans Kristian M VollanCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Elli PapaemmanuilCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Hans KossInstitute of Structural and Molecular Biology, Division of Biosciences, University College London, London WC1E 6BT, UK.
Tom D BunneyInstitute of Structural and Molecular Biology, Division of Biosciences, University College London, London WC1E 6BT, UK.
Claire HardyCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Olivia R JosephCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Sancha MartinCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Laura MudieCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Adam ButlerCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Jon W TeagueCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Meena PatilDepartment of Pathology, John Radcliffe Hospital, Oxford, OX3 9DS, UK.
Graham SteersDepartment of Pathology, John Radcliffe Hospital, Oxford, OX3 9DS, UK.
Yu CaoM. D. Anderson Cancer Center, The University of Texas, 1901 East Road, Houston, Texas 77054, USA.
Curtis GumbsM. D. Anderson Cancer Center, The University of Texas, 1901 East Road, Houston, Texas 77054, USA.
Davis IngramM. D. Anderson Cancer Center, The University of Texas, 1901 East Road, Houston, Texas 77054, USA.
Alexander J LazarM. D. Anderson Cancer Center, The University of Texas, 1901 East Road, Houston, Texas 77054, USA.
Latasha LittleM. D. Anderson Cancer Center, The University of Texas, 1901 East Road, Houston, Texas 77054, USA.
Harshad MahadeshwarM. D. Anderson Cancer Center, The University of Texas, 1901 East Road, Houston, Texas 77054, USA.
Alexei ProtopopovM. D. Anderson Cancer Center, The University of Texas, 1901 East Road, Houston, Texas 77054, USA.
Ghadah A Al SannaaM. D. Anderson Cancer Center, The University of Texas, 1901 East Road, Houston, Texas 77054, USA.
Sahil SethM. D. Anderson Cancer Center, The University of Texas, 1901 East Road, Houston, Texas 77054, USA.
Xingzhi SongM. D. Anderson Cancer Center, The University of Texas, 1901 East Road, Houston, Texas 77054, USA.
Jiabin TangM. D. Anderson Cancer Center, The University of Texas, 1901 East Road, Houston, Texas 77054, USA.
Jianhua ZhangM. D. Anderson Cancer Center, The University of Texas, 1901 East Road, Houston, Texas 77054, USA.
Vinod RaviM. D. Anderson Cancer Center, The University of Texas, 1901 East Road, Houston, Texas 77054, USA.
Keila E TorresM. D. Anderson Cancer Center, The University of Texas, 1901 East Road, Houston, Texas 77054, USA.
Bhavisha KhatriHistopathology, Royal National Orthopaedic Hospital NHS Trust, Stanmore, Middlesex, HA7 4LP, UK.
Dina HalaiHistopathology, Royal National Orthopaedic Hospital NHS Trust, Stanmore, Middlesex, HA7 4LP, UK.
Ioannis RoxanisDepartment of Pathology, John Radcliffe Hospital, Oxford, OX3 9DS, UK.
Daniel BaumhoerBone Tumour Reference Centre, Institute of Pathology, University Hospital Basel, Basel, Institute for Applied Cancer Science, Switzerland.
Roberto TiraboscoHistopathology, Royal National Orthopaedic Hospital NHS Trust, Stanmore, Middlesex, HA7 4LP, UK.
M Fernanda AmaryHistopathology, Royal National Orthopaedic Hospital NHS Trust, Stanmore, Middlesex, HA7 4LP, UK.
Chris BoshoffUniversity College London Cancer Institute, Huntley Street, London, WC1E 6BT, UK.
Ultan McDermottCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Matilda KatanInstitute of Structural and Molecular Biology, Division of Biosciences, University College London, London WC1E 6BT, UK.
Michael R StrattonCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
P Andrew FutrealCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Adrienne M FlanaganHistopathology, Royal National Orthopaedic Hospital NHS Trust, Stanmore, Middlesex, HA7 4LP, UK.
Adrian HarrisThe Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, OX3 9DS, UK.
Peter J CampbellCancer Genome Project, Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.
Wellcome Sanger Institute · GBThe University of Texas MD Anderson Cancer Center · USNational Health Service · GBJohn Radcliffe Hospital · GBInstitute of Structural and Molecular Biology · GBUniversity of Cambridge · GBOslo University Hospital · NOPfizer (United States) · USRoyal National Orthopaedic Hospital · GBUniversity Hospital of Basel · CHUniversity of Oxford · GB

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
Axl receptor signaling in MPNST; potential node for therapyK08CA160443 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI TORRES, KEILA ENITT · 2012 to 2016
$853k
Cancer Research UK 11359Cancer Research UK 16567NCI NIH HHS K08 CA160443NCI NIH HHS P30 CA016672Wellcome Trust 077012/Z/05/ZWellcome Trust 088340Wellcome Trust 093867Wellcome Trust 098051
6 · The paper itself

Abstract

Angiosarcoma is an aggressive malignancy that arises spontaneously or secondarily to ionizing radiation or chronic lymphoedema. Previous work has identified aberrant angiogenesis, including occasional somatic mutations in angiogenesis signaling genes, as a key driver of angiosarcoma. Here we employed whole-genome, whole-exome and targeted sequencing to study the somatic changes underpinning primary and secondary angiosarcoma. We identified recurrent mutations in two genes, PTPRB and PLCG1, which are intimately linked to angiogenesis. The endothelial phosphatase PTPRB, a negative regulator of vascular growth factor tyrosine kinases, harbored predominantly truncating mutations in 10 of 39 tumors (26%). PLCG1, a signal transducer of tyrosine kinases, encoded a recurrent, likely activating p.Arg707Gln missense variant in 3 of 34 cases (9%). Overall, 15 of 39 tumors (38%) harbored at least one driver mutation in angiogenesis signaling genes. Our findings inform and reinforce current therapeutic efforts to target angiogenesis signaling in angiosarcoma.

Indexed as

Analysis of VarianceBase SequenceExomeHemangiosarcomaHumansHuman Umbilical Vein Endothelial CellsMolecular Sequence DataMutationNeovascularization, PathologicPhospholipase C gammaReceptor-Like Protein Tyrosine Phosphatases, Class 3RNA InterferenceSequence Analysis, RNAVascular Endothelial Growth Factor APhospholipase C gammaPLCG1 protein, humanPTPRB protein, humanReceptor-Like Protein Tyrosine Phosphatases, Class 3Vascular Endothelial Growth Factor AVEGFA protein, human

Identifiers

PMID24633157
PMCPMC4032873
OpenAlexW1983035953

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.