Evidence map›Paper›PMID 24632562›Full record

ArticlePloS one2014

Chromosomal mapping of repetitive DNAs in Triportheus trifurcatus (Characidae, Characiformes): insights into the differentiation of the Z and W chromosomes.

Cassia Fernanda Yano, Juliana Poltronieri, Luiz Antonio Carlos Bertollo, Roberto Ferreira Artoni, Thomas Liehr, Marcelo de Bello Cioffi

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
8.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Mapping of Repetitive Sequences inAnimals : an open access journal from MDPI · 2024
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  8. A comparative cytogenetic study ofComparative cytogenetics · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Against the mainstream: exceptional evolutionary stability of ZW sex chromosomes across the fish families Triportheidae and Gasteropelecidae (Teleostei: Characiformes).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2021
    Article
  13. Article
  14. Comparative study of fourComparative cytogenetics · 2021
    Article
  15. Mobile Elements in Ray-Finned Fish Genomes.Life (Basel, Switzerland) · 2020
    Review
  16. Article
  17. Rex Retroelements and Teleost Genomes: An Overview.International journal of molecular sciences · 2018
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Cassia Fernanda YanoDepartamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, SP, Brazil.
Juliana PoltronieriDepartamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, SP, Brazil.
Luiz Antonio Carlos BertolloDepartamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, SP, Brazil.
Roberto Ferreira ArtoniDepartamento de Biologia Estrutural, Molecular e Genética, Universidade Estadual de Ponta Grossa, Ponta Grossa, PR, Brazil.
Thomas LiehrJena University Hospital, Friedrich Schiller University, Institute of Human Genetics, Jena, Thüringen, Germany.
Marcelo de Bello CioffiDepartamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, SP, Brazil.
Universidade Federal de São Carlos · BRJena University Hospital · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Repetitive DNA sequences play an important role in the structural and functional organization of chromosomes, especially in sex chromosome differentiation. The genus Triportheus represents an interesting model for such studies because all of its species analyzed so far contain a ZZ/ZW sex chromosome system. A close relationship has been found between the differentiation of the W chromosome and heterochromatinization, with the involvement of different types of repetitive DNA in this process. This study investigated several aspects of this association in the W chromosome of Triportheus trifurcatus (2 n = 52 chromosomes), including the cytogenetic mapping of repetitive DNAs such as telomeric sequences (TTAGGG)n, microsatellites and retrotransposons. A remarkable heterochromatic segment on the W chromosome was observed with a preferential accumulation of (CAC)10, (CAG)10, (CGG)10, (GAA)10 and (TA)15. The retrotransposons Rex1 and Rex3 showed a general distribution pattern in the chromosomes, and Rex6 showed a different distribution on the W chromosome. The telomeric repeat (TTAGGG)n was highly evident in both telomeres of all chromosomes without the occurrence of ITS. Thus, the differentiation of the W chromosome of T. trifurcatus is clearly associated with the formation of heterochromatin and different types of repetitive DNA, suggesting that these elements had a prominent role in this evolutionary process.

Indexed as

AnimalsCharacidaeChromosome MappingDNARepetitive Sequences, Nucleic AcidSex ChromosomesTelomereDNA

Identifiers

PMID24632562
PMCPMC3954618
OpenAlexW2094450098

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.