Evidence map›Paper›PMID 24632479›Full record

ArticleLife sciences2014

MicroRNA regulation of endothelin-1 mRNA in renal collecting duct cells.

Mollie E Jacobs, Lauren A Jeffers, Amanda K Welch, Charles S Wingo, Brian D Cain

Open access · greenAbstract read
In one paragraph

Article in Life sciences, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Frontiers in physiology · 2020
    Article
  3. MicroRNA-709 Mediates Acute Tubular Injury through Effects on Mitochondrial Function.Journal of the American Society of Nephrology : JASN · 2018
    Article
  4. SGK1 regulation by miR-466g in cortical collecting duct cells.American journal of physiology. Renal physiology · 2016
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Mollie E JacobsDepartment of Biochemistry and Molecular Biology, University of Florida, Gainesville, FL 32610, USA.
Lauren A JeffersDepartment of Biochemistry and Molecular Biology, University of Florida, Gainesville, FL 32610, USA.
Amanda K WelchDepartment of Nephrology, University of Florida, Gainesville, FL 32610, USA; North Florida/South Georgia Veterans Health System, Gainesville, FL 32610, USA.
Charles S WingoDepartment of Nephrology, University of Florida, Gainesville, FL 32610, USA; North Florida/South Georgia Veterans Health System, Gainesville, FL 32610, USA.
Brian D CainDepartment of Biochemistry and Molecular Biology, University of Florida, Gainesville, FL 32610, USA. Electronic address: bcain@ufl.edu.
University of Florida · USNorth Florida/South Georgia Veterans Health System · US

Funding

TRAINING PROGRAM IN ACADEMIC NEPHROLOGYT32DK007357 · NIDDK · STANFORD UNIVERSITY · PI CHERTOW, GLENN MATTHEW · 1986 to 2022
$4.8M
Multidisciplinary Training Program in HypertensionT32HL083810 · NHLBI · UNIVERSITY OF FLORIDA · PI WOOD, CHARLES E · 2007 to 2017
$2.5M
An Aldosterone-Endothelin Feedback Mechanism on Sodium HomeostasisR01DK082680 · NIDDK · UNIVERSITY OF FLORIDA · PI CAIN, BRIAN D., WINGO, CHARLES S · 2009 to 2012
$1.2M
Training in Endocrine, Metabolic, and Prenatal Basis of Chronic Kidney DiseaseT32DK076541 · NIDDK · UNIVERSITY OF FLORIDA · PI WOOD, CHARLES E · 2008 to 2012
$339k
NHLBI NIH HHS T32 HL083810NIDDK NIH HHS 1R01DK02680NIDDK NIH HHS 5T32DK076541NIDDK NIH HHS R01 DK082680NIDDK NIH HHS T32 DK007357NIDDK NIH HHS T32 DK076541
6 · The paper itself

Abstract

aimsRecently, microRNAs (miRNAs) have been implicated in control of Edn1 mRNA in several tissues. Here we examined the role of miRNA action on Edn1 mRNA expression in renal distal collecting duct cells. MAIN

methodsA microarray study was conducted to provide a comprehensive assessment of miRNAs present in a murine inner medullary collecting duct (mIMCD-3) cell line. The experiment was designed as a comparison between mIMCD-3 cells grown in the presence and absence of aldosterone. Argonaute (Ago) immunoprecipitation experiments were used to investigate binding of the RNA induced silencing complex (RISC) to Edn1 mRNA. KEY

findingsThirty-four miRNAs were detected in very high abundance in mIMCD-3 cells, and a large number of others were present at lower levels. The microarray experiments were validated by quantitative PCR analysis of selected miRNAs. The microarray data, in combination with in silico examination of the Edn1 3' UTR provided a panel of candidate miRNAs that could act upon the Edn1 expression. Edn1 mRNA was co-immunoprecipitated with an Argonaute protein antibody, and this interaction was blocked by anti-miR-709 oligonucleotides. SIGNIFICANCE: These results define the miRNA landscape of the mIMCD-3 cell line. Moreover, Edn1 was shown to interact with Argonaute protein suggesting that it is a target of the RNA induced silencing complex (RISC).

Indexed as

3' Untranslated RegionsAldosteroneAnimalsArgonaute ProteinsBinding SitesCell LineEndothelin-1Gene Expression RegulationImmunoprecipitationKidney Tubules, CollectingMiceMicroRNAsOligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionRNA, Messenger3' Untranslated RegionsAldosteroneArgonaute ProteinsEndothelin-1MicroRNAsRNA, MessengerEndothelin-1KidneymiRNA

Identifiers

PMID24632479
PMCPMC4163143
OpenAlexW1969085198

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.