Evidence map›Paper›PMID 24630099›Full record

ArticleMethods in enzymology2014

Bacterial actin-like proteins: purification and characterization of self-assembly properties.

Natalie A Petek, R Dyche Mullins

Open access · greenAbstract read
In one paragraph

Article in Methods in enzymology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Archaeal actin from a hyperthermophile forms a single-stranded filament.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Natalie A PetekDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, California, USA.
R Dyche MullinsDepartment of Cellular and Molecular Pharmacology, University of California, San Francisco, California, USA; Howard Hughes Medical Institute, Chevy Chase, Maryland, USA. Electronic address: dyche@mullinslab.ucsf.edu.
Howard Hughes Medical Institute · USUniversity of California, San Francisco · US

Funding

MECHANISMS OF ARP2/3 ACTIVATION AND FUNCTIONR01GM061010 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MULLINS, R DYCHE · 2000 to 2015
$3.8M
Regulation and Function of a Bacterial CytoskeletonR01GM079556 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MULLINS, R DYCHE · 2006 to 2015
$2.1M
Assembly dynamics and cellular function of Actin-like proteins in bacteriaR01GM095263 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MULLINS, R DYCHE · 2010 to 2013
$1.4M
NIGMS NIH HHS R01 GM061010NIGMS NIH HHS R01 GM079556NIGMS NIH HHS R01 GM095263
6 · The paper itself

Abstract

The sequence, structure, and assembly dynamics of eukaryotic actins are conserved across phyla. In contrast, actin-like proteins (ALPs) from eubacteria share little sequence homology, form polymers with different architectures, and assemble with different kinetics. The structural and functional diversity of the bacterial ALPs appears to arise from their (i) high degree of functional specialization and (ii) small number of regulatory factors. To understand the molecular mechanism by which a given ALP carries out its biological function, we must, therefore, understand its unique architecture and assembly dynamics. In this chapter, we provide a basic toolbox for studying the self-assembly of uncharacterized ALPs, including methods for characterizing the architecture and stability of polymers, specifying the mechanism of their nucleation, and measuring their rate of growth. Determining these basic properties provides a stable base for more complex reconstitutions of biological function.

Indexed as

ActinsBacteriaBacterial ProteinsFluorescence Resonance Energy TransferLightMicroscopy, ElectronMicroscopy, FluorescenceScattering, RadiationActinsBacterial ProteinsBacterial actin-like proteins (ALPs)CytoskeletonProkaryotic cell biologySelf-assembly

Identifiers

PMID24630099
PMCPMC4117586
OpenAlexW2413591723

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.