Evidence map›Paper›PMID 24629485›Full record

ReviewDNA repair2014

Studying the organization of DNA repair by single-cell and single-molecule imaging.

Stephan Uphoff, Achillefs N Kapanidis

Abstract readReview
In one paragraph

Review in DNA repair, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. From single bacterial cell imaging towardsEssays in biochemistry · 2019
    Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Article
  16. Review
  17. Review
  18. DNA Sequence Alignment during Homologous Recombination.The Journal of biological chemistry · 2016
    Review
  19. Article
  20. Regulation of recombination and genomic maintenance.Cold Spring Harbor perspectives in biology · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Stephan UphoffDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom. Electronic address: stephan.uphoff@bioch.ox.ac.uk.
Achillefs N KapanidisBiological Physics Research Group, Clarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, United Kingdom. Electronic address: a.kapanidis1@physics.ox.ac.uk.

Funding

Biotechnology and Biological Sciences Research Council BB/H01795X/1European Research Council 261227Wellcome Trust
6 · The paper itself

Abstract

DNA repair safeguards the genome against a diversity of DNA damaging agents. Although the mechanisms of many repair proteins have been examined separately in vitro, far less is known about the coordinated function of the whole repair machinery in vivo. Furthermore, single-cell studies indicate that DNA damage responses generate substantial variation in repair activities across cells. This review focuses on fluorescence imaging methods that offer a quantitative description of DNA repair in single cells by measuring protein concentrations, diffusion characteristics, localizations, interactions, and enzymatic rates. Emerging single-molecule and super-resolution microscopy methods now permit direct visualization of individual proteins and DNA repair events in vivo. We expect much can be learned about the organization of DNA repair by linking cell heterogeneity to mechanistic observations at the molecular level.

Indexed as

DNA RepairBacteriaDNA Repair EnzymesFluorescence Recovery After PhotobleachingMicroscopy, FluorescenceSingle-Cell AnalysisDNA Repair EnzymesCell heterogeneityDNA damage responsesDNA repairSingle-cell imagingSingle-molecule fluorescenceSuper-resolution microscopy

Identifiers

PMID24629485
PMCPMC4119245

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.