Evidence map›Paper›PMID 24627493›Full record

ArticleThe Journal of biological chemistry2014

Yeast AMP-activated protein kinase monitors glucose concentration changes and absolute glucose levels.

Loubna Bendrioua, Maria Smedh, Joachim Almquist, Marija Cvijovic, Mats Jirstrand, Mattias Goksör, Caroline B Adiels, Stefan Hohmann

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Fine-Tuning of Energy Levels RegulatesFrontiers in physiology · 2020
    Article
  17. Article
  18. Frontiers in microbiology · 2018
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Loubna BendriouaFrom the Department of Chemistry and Molecular Biology, University of Gothenburg, 40530 Göteborg, Sweden.
Maria Smedh
Joachim Almquist
Marija Cvijovic
Mats Jirstrand
Mattias Goksör
Caroline B Adiels
Stefan Hohmann
University of Gothenburg · SEFraunhofer Chalmers Research Centre for Industrial Mathematics · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Analysis of the time-dependent behavior of a signaling system can provide insight into its dynamic properties. We employed the nucleocytoplasmic shuttling of the transcriptional repressor Mig1 as readout to characterize Snf1-Mig1 dynamics in single yeast cells. Mig1 binds to promoters of target genes and mediates glucose repression. Mig1 is predominantly located in the nucleus when glucose is abundant. Upon glucose depletion, Mig1 is phosphorylated by the yeast AMP-activated kinase Snf1 and exported into the cytoplasm. We used a three-channel microfluidic device to establish a high degree of control over the glucose concentration exposed to cells. Following regimes of glucose up- and downshifts, we observed a very rapid response reaching a new steady state within less than 1 min, different glucose threshold concentrations depending on glucose up- or downshifts, a graded profile with increased cell-to-cell variation at threshold glucose concentrations, and biphasic behavior with a transient translocation of Mig1 upon the shift from high to intermediate glucose concentrations. Fluorescence loss in photobleaching and fluorescence recovery after photobleaching data demonstrate that Mig1 shuttles constantly between the nucleus and cytoplasm, although with different rates, depending on the presence of glucose. Taken together, our data suggest that the Snf1-Mig1 system has the ability to monitor glucose concentration changes as well as absolute glucose levels. The sensitivity over a wide range of glucose levels and different glucose concentration-dependent response profiles are likely determined by the close integration of signaling with the metabolism and may provide for a highly flexible and fast adaptation to an altered nutritional status.

Indexed as

AMP-Activated Protein KinasesCell NucleusCytoplasmFluorescence Recovery After PhotobleachingGlucoseGreen Fluorescent ProteinsMicrofluidicsMicroscopy, FluorescencePhosphorylationProtein Serine-Threonine KinasesProtein TransportRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal TransductionAMP-Activated Protein KinasesGlucoseGreen Fluorescent ProteinsMIG1 protein, S cerevisiaeProtein Serine-Threonine KinasesRepressor ProteinsSaccharomyces cerevisiae ProteinsSNF1-related protein kinasesAMP-activated Kinase (AMPK)Dynamic ControlGlucose MetabolismNuclear TranslocationSignal TransductionYeast Physiology

Identifiers

PMID24627493
PMCPMC4007474
OpenAlexW2024272267

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.