Evidence map›Paper›PMID 24626416›Full record

ArticleRevista do Instituto de Medicina Tropical de Sao Paulo

Quantitative real-time PCR (q-PCR) for sputum smear diagnosis of pulmonary tuberculosis among people with HIV/AIDS.

Yvana Maria Maia de Albuquerque, Ana Luiza Magalhães de Andrade Lima, Ana Kelly Lins, Marcelo Magalhães, Vera Magalhães

Open access · diamondAbstract readEvaluation Study
In one paragraph

Article in Revista do Instituto de Medicina Tropical de Sao Paulo. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 3 pooled it
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 3 syntheses or guidelines pooled it, 11 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
  5. Article
  6. Use of Digital Droplet PCR to DetectFrontiers in cellular and infection microbiology · 2017
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yvana Maria Maia de AlbuquerqueTropical Medicine Post-graduation, Universidade Federal de Pernambuco, RecifePE, Brazil, Tropical Medicine Post-graduation, Universidade Federal de Pernambuco, Recife-PE, Brazil.
Ana Luiza Magalhães de Andrade LimaFaculdade Pernambucana de Saúde, RecifePE, Brazil, Faculdade Pernambucana de Saúde, Recife-PE, Brazil.
Ana Kelly LinsLaboratório Marcelo Magalhães, RecifePE, Brazil, Laboratório Marcelo Magalhães, Recife-PE, Brazil.
Marcelo MagalhãesLaboratório Marcelo Magalhães, RecifePE, Brazil, Laboratório Marcelo Magalhães, Recife-PE, Brazil.
Vera MagalhãesTropical Medicine Post-graduation, Universidade Federal de Pernambuco, RecifePE, Brazil, Tropical Medicine Post-graduation, Universidade Federal de Pernambuco, Recife-PE, Brazil.
Universidade Federal de Pernambuco · BRFaculdade Pernambucana de Saúde

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo assess quantitative real-time polymerase chain reaction (q-PCR) for the sputum smear diagnosis of pulmonary tuberculosis (PTB) in patients living with HIV/AIDS with a clinical suspicion of PTB.

methodThis is a prospective study to assess the accuracy of a diagnostic test, conducted on 140 sputum specimens from 140 patients living with HIV/AIDS with a clinical suspicion of PTB, attended at two referral hospitals for people living with HIV/AIDS in the city of Recife, Pernambuco, Brazil. A Löwenstein-Jensen medium culture and 7H9 broth were used as gold standard.

resultsOf the 140 sputum samples, 47 (33.6%) were positive with the gold standard. q-PCR was positive in 42 (30%) of the 140 patients. Only one (0.71%) did not correspond to the culture. The sensitivity, specificity and accuracy of the q-PCR were 87.2%, 98.9% and 95% respectively. In 39 (93%) of the 42 q-PCR positive cases, the CT (threshold cycle) was equal to or less than 37.

conclusionq-PCR performed on sputum smears from patients living with HIV/AIDS demonstrated satisfactory sensitivity, specificity and accuracy, and may therefore be recommended as a method for diagnosing PTB.

Indexed as

Real-Time Polymerase Chain ReactionAdultAIDS-Related Opportunistic InfectionsDNA, BacterialFemaleHumansMaleMiddle AgedMycobacterium tuberculosisPredictive Value of TestsProspective StudiesSensitivity and SpecificitySputumTuberculosis, PulmonaryYoung AdultDNA, Bacterial

Identifiers

PMID24626416
PMCPMC4085841
OpenAlexW2052848859

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.