Evidence map›Paper›PMID 24626302›Full record

ArticleMemorias do Instituto Oswaldo Cruz2014

Characterisation of divergent flavivirus NS3 and NS5 protein sequences detected in Rhipicephalus microplus ticks from Brazil.

Sandra Regina Maruyama, Luiza Antunes Castro-Jorge, José Marcos Chaves Ribeiro, Luiz Gustavo Gardinassi, Gustavo Rocha Garcia, Lucinda Giampietro Brandão, Aline Rezende Rodrigues, Marcos Ituo Okada, Emiliana Pereira Abrão, Beatriz Rossetti Ferreira and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Memorias do Instituto Oswaldo Cruz, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 80 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Aquatic Flaviviruses.Journal of virology · 2022
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Sandra Regina MaruyamaFaculdade de Medicina de Ribeirão Preto.
Luiza Antunes Castro-JorgeFaculdade de Medicina de Ribeirão Preto.
José Marcos Chaves RibeiroFaculdade de Medicina de Ribeirão Preto.
Luiz Gustavo GardinassiNational Institutes of Health, National Institute of Allergy and Infectious Diseases, RockvilleMD, USA.
Gustavo Rocha GarciaFaculdade de Medicina de Ribeirão Preto.
Lucinda Giampietro BrandãoFaculdade de Medicina de Ribeirão Preto.
Aline Rezende RodriguesVallée SA, São PauloSP, Brasil.
Marcos Ituo OkadaFaculdade de Tecnologia, AraçatubaSP, Brasil.
Emiliana Pereira AbrãoFaculdade de Medicina de Ribeirão Preto.
Beatriz Rossetti FerreiraUniversidade de São Paulo, Escola de Enfermagem de Ribeirão Preto, Ribeirão PretoSP, Brasil.
Benedito Antonio Lopes da FonsecaFaculdade de Medicina de Ribeirão Preto.
Isabel Kinney Ferreira de Miranda-SantosFaculdade de Medicina de Ribeirão Preto.
Fundação Faculdade de Medicina · BRNational Institutes of Health · USUniversidade de São Paulo · BRVale (Brazil) · BR

Funding

Vector-Borne Diseases: Biology Of Vector Host RelationshipZIAAI000810 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI RIBEIRO, JOSE · 2009 to 2025
$20.8M
Intramural NIH HHS
6 · The paper itself

Abstract

Transcripts similar to those that encode the nonstructural (NS) proteins NS3 and NS5 from flaviviruses were found in a salivary gland (SG) complementary DNA (cDNA) library from the cattle tick Rhipicephalus microplus. Tick extracts were cultured with cells to enable the isolation of viruses capable of replicating in cultured invertebrate and vertebrate cells. Deep sequencing of the viral RNA isolated from culture supernatants provided the complete coding sequences for the NS3 and NS5 proteins and their molecular characterisation confirmed similarity with the NS3 and NS5 sequences from other flaviviruses. Despite this similarity, phylogenetic analyses revealed that this potentially novel virus may be a highly divergent member of the genus Flavivirus. Interestingly, we detected the divergent NS3 and NS5 sequences in ticks collected from several dairy farms widely distributed throughout three regions of Brazil. This is the first report of flavivirus-like transcripts in R. microplus ticks. This novel virus is a potential arbovirus because it replicated in arthropod and mammalian cells; furthermore, it was detected in a cDNA library from tick SGs and therefore may be present in tick saliva. It is important to determine whether and by what means this potential virus is transmissible and to monitor the virus as a potential emerging tick-borne zoonotic pathogen.

Indexed as

AnimalsBrazilCattleConserved SequenceDEAD-box RNA HelicasesFlavivirusGene LibraryHydrophobic and Hydrophilic InteractionsNucleoside-TriphosphatasePhylogenyPolymerase Chain ReactionRhipicephalusRNA HelicasesRNA, ViralSequence AlignmentSequence Analysis, ProteinDEAD-box RNA HelicasesNS3 protein, flavivirusNS5 protein, flavivirusNucleoside-TriphosphataseRNA HelicasesRNA, ViralSerine EndopeptidasesTissue ExtractsViral Nonstructural ProteinsViral Proteases

Identifiers

PMID24626302
PMCPMC4005522
OpenAlexW1965911851

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.