Evidence map›Paper›PMID 24626181›Full record

ArticleCell cycle (Georgetown, Tex.)2014

Identification of the nuclear localization signal of SALL4B, a stem cell transcription factor.

Meng Wu, Feikun Yang, Zhihua Ren, Yongping Jiang, Yupo Ma, Yan Chen, Wei Dai

Open access · bronzeAbstract read
In one paragraph

Article in Cell cycle (Georgetown, Tex.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 4 countries.

Meng WuBiopharmaceutical Research Center; Chinese Academy of Medical Sciences & Peking Union Medical College; Suzhou, China.
Feikun YangDepartment of Environmental Medicine; New York University Langone Medical Center; Tuxedo, NY USA.
Zhihua RenBiopharmaceutical Research Center; Chinese Academy of Medical Sciences & Peking Union Medical College; Suzhou, China.
Yongping JiangBiopharmaceutical Research Center; Chinese Academy of Medical Sciences & Peking Union Medical College; Suzhou, China.
Yupo MaDepartment of Pathology; The State University of New York at Stony Brook; Stony Brook, NY USA.
Yan ChenCenter for Drug Discovery; Northeastern University; Boston, MA USA and Sahlgrenska Academy; Gothenburg University; Gothenburg, Sweden.
Wei DaiDepartment of Environmental Medicine; New York University Langone Medical Center; Tuxedo, NY USA.
NYU Langone Health · USPeking Union Medical College Hospital · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNState University of New York · USUniversidad del Noreste · MX

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ANIRBAN MAITRA · 1985 to 2026
$83.1M
RESEARCH IN ENVIRONMENTAL HEALTH SCIENCES (CENTER GRANT)P30ES000260 · NIEHS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ZELIKOFF, JUDITH TERRY · 1985 to 2020
$26.1M
Molecular mechanisms underlying chromosomal instability and aneuploidyR01CA090658 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI DAI, WEI · 2001 to 2012
$2.9M
Study of Anti-Survival signals in NF1R01CA153354 · NCI · NORTHEASTERN UNIVERSITY · PI CHEN, CHANGYAN · 2012 to 2017
$1.6M
Plk3 in lung cancerR03ES019929 · NIEHS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI XU, DAZHONG · 2011 to 2012
$160k
NCI NIH HHS CA090658NCI NIH HHS P30 CA016087NCI NIH HHS R01 CA090658NCI NIH HHS R01 CA153354NIEHS NIH HHS ES000260NIEHS NIH HHS ES019929NIEHS NIH HHS P30 ES000260NIEHS NIH HHS R03 ES019929
6 · The paper itself

Abstract

SALL4B plays a critical role in maintaining the pluripotency of embryonic stem cells and hematopoietic stem cells. SALL4B primarily functions as a transcription factor, and, thus, its nuclear localization is paramount to its biological activities. To understand the structural basis by which SALL4B was transported and retained in the nucleus, we made a series of SALL4B constructs with deletions or point mutations. We found that K64R mutation resulted in a random distribution of SALL4B within the cell. An analysis of neighboring amino acid sequences revealed that (64)KRLR (67) in SALL4B matches exactly with the canonical nuclear localization signal (K-K/R-x-K/R). SALL4B fragment (a.a. 50-109) that contained KRLR was sufficient for targeting GFP-tagged SALL4B to the nucleus, whereas K64R mutation led to a random distribution of GFP-SALL4B signal within the cell. We further demonstrated that the nuclear localization was essential for transactivating luciferase reporter gene driven by OCT4 promoter, a known transcriptional target of SALL4B. Therefore, our study identifies the KRLR sequence as a bona fide nuclear localization signal for SALL4B.

Indexed as

Nuclear Localization SignalsAmino Acid SequenceCell NucleusHEK293 CellsHeLa CellsHumansMolecular Sequence DataMutationProtein TransportStem CellsTranscription FactorsNuclear Localization SignalsSALL4 protein, humanTranscription Factorsnuclear localizationSALL4Bstem cellstranscription factor

Identifiers

PMID24626181
PMCPMC4050143
OpenAlexW1992638389

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.