Evidence map›Paper›PMID 24625964›Full record

ArticlePloS one2014

Nonproteolytic roles of 19S ATPases in transcription of CIITApIV genes.

Nagini Maganti, Tomika D Moody, Agnieszka D Truax, Meghna Thakkar, Alexander M Spring, Markus W Germann, Susanna F Greer

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Nagini MagantiGraduate Program in Cell Biology and Immunology, Department of Biology, Georgia State University, Atlanta, Georgia, United States of America.
Tomika D MoodyGraduate Program in Cell Biology and Immunology, Department of Biology, Georgia State University, Atlanta, Georgia, United States of America.
Agnieszka D TruaxGraduate Program in Cell Biology and Immunology, Department of Biology, Georgia State University, Atlanta, Georgia, United States of America.
Meghna ThakkarGraduate Program in Cell Biology and Immunology, Department of Biology, Georgia State University, Atlanta, Georgia, United States of America.
Alexander M SpringDepartment of Chemistry, Georgia State University, Atlanta, Georgia, United States of America.
Markus W GermannDepartment of Chemistry, Georgia State University, Atlanta, Georgia, United States of America.
Susanna F GreerGraduate Program in Cell Biology and Immunology, Department of Biology, Georgia State University, Atlanta, Georgia, United States of America.
Georgia State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accumulating evidence shows the 26S proteasome is involved in the regulation of gene expression. We and others have demonstrated that proteasome components bind to sites of gene transcription, regulate covalent modifications to histones, and are involved in the assembly of activator complexes in mammalian cells. The mechanisms by which the proteasome influences transcription remain unclear, although prior observations suggest both proteolytic and non-proteolytic activities. Here, we define novel, non-proteolytic, roles for each of the three 19S heterodimers, represented by the 19S ATPases Sug1, S7, and S6a, in mammalian gene expression using the inflammatory gene CIITApIV. These 19S ATPases are recruited to induced CIITApIV promoters and also associate with CIITA coding regions. Additionally, these ATPases interact with elongation factor PTEFb complex members CDK9 and Hexim-1 and with Ser5 phosphorylated RNA Pol II. Both the generation of transcripts from CIITApIV and efficient recruitment of RNA Pol II to CIITApIV are negatively impacted by siRNA mediated knockdown of these 19S ATPases. Together, these results define novel roles for 19S ATPases in mammalian gene expression and indicate roles for these ATPases in promoting transcription processes.

Indexed as

Transcription, GeneticAdaptor Proteins, Signal TransducingAdenosine TriphosphatasesAntibodiesATPases Associated with Diverse Cellular ActivitiesGene Expression RegulationHeLa CellsHistonesHumansLIM Domain ProteinsNuclear ProteinsProteasome Endopeptidase ComplexProtein Structure, TertiaryRNA Polymerase IIRNA, Small InterferingTrans-ActivatorsAdaptor Proteins, Signal TransducingAdenosine TriphosphatasesAntibodiesATPases Associated with Diverse Cellular ActivitiesATP dependent 26S proteaseHistonesLIM Domain ProteinsMHC class II transactivator proteinNuclear ProteinsProteasome Endopeptidase ComplexPSMC5 protein, humanRNA Polymerase IIRNA, Small InterferingTrans-ActivatorsTranscription Factors

Identifiers

PMID24625964
PMCPMC3953376
OpenAlexW2028837507

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.