Evidence map›Paper›PMID 24625633›Full record

ArticlePloS one2014

Production of squalene in Synechocystis sp. PCC 6803.

Elias Englund, Bagmi Pattanaik, Sarojini Jayantha K Ubhayasekera, Karin Stensjö, Jonas Bergquist, Pia Lindberg

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 108 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Perspectives of cyanobacterial cell factories.Photosynthesis research · 2024
    Review
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Recent advances in the microbial production of squalene.World journal of microbiology & biotechnology · 2022
    Review
  14. Article
  15. Article
  16. Metabolic engineering ofMetabolic engineering communications · 2021
    Article
  17. Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Elias EnglundMicrobial Chemistry, Department of Chemistry, Ångström and Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Bagmi PattanaikMicrobial Chemistry, Department of Chemistry, Ångström and Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Sarojini Jayantha K UbhayasekeraAnalytical Chemistry, Department of Chemistry, BMC and Science for Life Laboratory, Uppsala, Sweden.
Karin StensjöMicrobial Chemistry, Department of Chemistry, Ångström and Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Jonas BergquistAnalytical Chemistry, Department of Chemistry, BMC and Science for Life Laboratory, Uppsala, Sweden.
Pia LindbergMicrobial Chemistry, Department of Chemistry, Ångström and Science for Life Laboratory, Uppsala University, Uppsala, Sweden.
Science for Life Laboratory · SEUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years, there has been an increased interest in the research and development of sustainable alternatives to fossil fuels. Using photosynthetic microorganisms to produce such alternatives is advantageous, since they can achieve direct conversion of carbon dioxide from the atmosphere into the desired product, using sunlight as the energy source. Squalene is a naturally occurring 30-carbon isoprenoid, which has commercial use in cosmetics and in vaccines. If it could be produced sustainably on a large scale, it could also be used instead of petroleum as a raw material for fuels and as feedstock for the chemical industry. The unicellular cyanobacterium Synechocystis PCC 6803 possesses a gene, slr2089, predicted to encode squalene hopene cyclase (Shc), an enzyme converting squalene into hopene, the substrate for forming hopanoids. Through inactivation of slr2089 (shc), we explored the possibility to produce squalene using cyanobacteria. The inactivation led to accumulation of squalene, to a level over 70 times higher than in wild type cells, reaching 0.67 mg OD750(-1) L(-1). We did not observe any significant growth deficiency in the Δshc strain compared to the wild type Synechocystis, even at high light conditions, suggesting that the observed squalene accumulation was not detrimental to growth, and that formation of hopene by Shc is not crucial for growth under normal conditions, nor for high-light stress tolerance. Effects of different light intensities and growth stages on squalene accumulation in the Δshc strain were investigated. We also identified a gene, sll0513, as a putative squalene synthase in Synechocystis, and verified its function by inactivation. In this work, we show that it is possible to use the cyanobacterium Synechocystis to generate squalene, a hydrocarbon of commercial interest and a potential biofuel. We also report the first identification of a squalene hopene cyclase, and the second identification of squalene synthase, in cyanobacteria.

Indexed as

Bacterial ProteinsBiofuelsCarbon DioxideDNA, BacterialEscherichia coliGas Chromatography-Mass SpectrometryGenes, BacterialGenetic Complementation TestGenotypeIntramolecular TransferasesLightRNA, BacterialSqualeneSynechocystisTerpenesBacterial ProteinsBiofuelsCarbon DioxideDNA, BacterialIntramolecular TransferasesRNA, BacterialSqualenesqualene-hopene cyclaseTerpenes

Identifiers

PMID24625633
PMCPMC3953072
OpenAlexW2026174502

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.