Evidence map›Paper›PMID 24623813›Full record

ArticleNucleic acids research2014

Regulation of FANCD2 and FANCI monoubiquitination by their interaction and by DNA.

Simonne Longerich, Youngho Kwon, Miaw-Sheue Tsai, Aye Su Hlaing, Gary M Kupfer, Patrick Sung

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 84 citations in OpenAlex.

  1. Review
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  14. Focal Point of Fanconi Anemia Signaling.International journal of molecular sciences · 2021
    Review
  15. Article
  16. Review
  17. Promyelocytic Leukemia Proteins Regulate Fanconi Anemia Gene Expression.International journal of molecular sciences · 2021
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Simonne LongerichDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520, USA.
Youngho KwonDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520, USA.
Miaw-Sheue TsaiLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Aye Su HlaingLife Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.
Gary M KupferDepartment of Pathology, Yale University School of Medicine, New Haven, CT 06520, USA.
Patrick SungDepartment of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT 06520, USA patrick.sung@yale.edu.
Yale University · USLawrence Berkeley National Laboratory · US

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI WALTER J. CHAZIN · 2001 to 2026
$89.6M
Yale University Clinical and Translational Science Award ProgramUL1TR000142 · NCATS · YALE UNIVERSITY · PI SHERWIN, ROBERT S · 2012 to 2015
$31.8M
Mechanistic Dissection of the Fanconi Anemia Pathway of DNA Damage Response and RR01CA168635 · NCI · YALE UNIVERSITY · PI Gary M Kupfer, Patrick Sung · 2013 to 2026
$5.8M
The Fanconi Anemia Core and D2 ComplexesR01HL063776 · NHLBI · YALE UNIVERSITY · PI KUPFER, GARY M. · 2000 to 2014
$5.3M
Molecular Basis of BRCA2-mediated DNA Repair and Cancer AvoidanceR01ES015252 · NIEHS · YALE UNIVERSITY · PI SUNG, PATRICK · 2007 to 2016
$3.8M
NCATS NIH HHS UL1 TR000142NCI NIH HHS P01 CA092584NCI NIH HHS P01CA92584NCI NIH HHS R01 CA168635NCI NIH HHS R01CA168635NHLBI NIH HHS R01-HL063776NIEHS NIH HHS R01 ES015252NIEHS NIH HHS R01ES015252
6 · The paper itself

Abstract

FANCD2 and FANCI function together in the Fanconi anemia network of deoxyribonucleic acid (DNA) crosslink repair. These proteins form the dimeric ID2 complex that binds DNA and becomes monoubiquitinated upon exposure of cells to DNA crosslinking agents. The monoubiquitinated ID2 complex is thought to facilitate DNA repair via recruitment of specific nucleases, translesion DNA polymerases and the homologous recombination machinery. Using the ubiquitin conjugating enzyme (E2) UBE2T and ubiquitin ligase (E3) FANCL, monoubiquitination of human FANCD2 and FANCI was examined. The ID2 complex is a poor substrate for monoubiquitination, consistent with the published crystal structure showing the solvent inaccessibility of the target lysines. Importantly, FANCD2 monoubiquitination within the ID2 complex is strongly stimulated by duplex or branched DNA, but unstructured single-stranded DNA or chromatinized DNA is ineffective. Interaction of FANCL with the ID2 complex is indispensable for its E3 ligase efficacy. Interestingly, mutations in FANCI that impair its DNA binding activity compromise DNA-stimulated FANCD2 monoubiquitination. Moreover, we demonstrate that in the absence of FANCD2, DNA also stimulates FANCI monoubiquitination, but in a FANCL-independent manner. These results implicate the role of a proper DNA ligand in FANCD2 and FANCI monoubiquitination, and reveal regulatory mechanisms that are dependent on protein-protein and protein-DNA interactions.

Indexed as

UbiquitinationAmino Acid SubstitutionAnimalsDNA, CircularDNA, ViralFanconi Anemia Complementation Group D2 ProteinFanconi Anemia Complementation Group L ProteinFanconi Anemia Complementation Group ProteinsHumansInhibitor of Differentiation Protein 2NucleosomesPlasmidsProtein BindingSf9 CellsSpodopteraSubstrate SpecificityDNA, CircularDNA, ViralFANCD2 protein, humanFANCI protein, humanFANCL protein, humanFanconi Anemia Complementation Group D2 ProteinFanconi Anemia Complementation Group L ProteinFanconi Anemia Complementation Group ProteinsID2 protein, humanInhibitor of Differentiation Protein 2Nucleosomes

Identifiers

PMID24623813
PMCPMC4027212
OpenAlexW2133464003

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.