Evidence map›Paper›PMID 24619162›Full record

ArticleJournal of molecular evolution2014

The origin and evolution of vertebrate glycine transporters.

Max Shpak, Luciana Girotto Gentil, Manuel Miranda

Abstract readLetter
PubMed Publisher
In one paragraph

Article in Journal of molecular evolution, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact, top 91% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
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  3. TheMedical research archives · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Max ShpakNeuroTexas Institute, St. David's Healthcare, Austin, TX, 78705, USA, shpak.max@gmail.com.
Luciana Girotto Gentil
Manuel Miranda
The University of Texas at El Paso · USSt. David’s HealthCare · US

Funding

UTEP DIDARP: Vulnerability Issues in Drug Abuse (VIDA)R24DA029989 · NIDA · UNIVERSITY OF TEXAS EL PASO · PI CASTANEDA, EDWARD · 2011 to 2015
$2.1M
Insights into the Regulation of the Glycine Transporter 1 (GlyT1)SC1MH086070 · NIMH · UNIVERSITY OF TEXAS EL PASO · PI MIRANDA-ARANGO, MANUEL · 2008 to 2011
$1.0M
NIDA NIH HHS DA029989NIMH NIH HHS 5SC1MH 086070-04
6 · The paper itself

Abstract

In the vertebrate central nervous system, glycinergic neurotransmission is regulated by the action of the glycine transporters 1 and 2 (GlyT1 and GlyT2)--members of the solute carrier family 6 (SLC6). Several invertebrate deuterostomes have two paralogous glycine carrier genes, with one gene in the pair having greater sequence identity and higher alignment scores with respect to GlyT1 and the other paralog showing greater similarity to GlyT2. In phylogenetic trees, GlyT2-like sequences from invertebrate deuterostomes form a monophyletic subclade with vertebrate GlyT2, while invertebrate GlyT1-like proteins constitute an outgroup to both the GlyT2-like proteins and to vertebrate GlyT1 sequences. These results are consistent with the hypothesis that vertebrate GlyT1 and GlyT2 are, respectively, derived from GlyT1- and GlyT2-like genes in invertebrate deuterostomes. This implies that the gene duplication which gave rise to these paralogs occurred prior to the origin of vertebrates. GlyT2 subsequently diverged significantly from its invertebrate orthologs (i.e., through the acquisition of a unique N-terminus) as a consequence of functional specialization, being expressed principally in the lower CNS; while GlyT1 has activity in both the lower CNS and several regions of the forebrain.

Indexed as

Evolution, MolecularAnimalsCaenorhabditis elegans ProteinsChromosome MappingGABA Plasma Membrane Transport ProteinsGlycine Plasma Membrane Transport ProteinsHumansPhylogenySequence AlignmentVertebratesCaenorhabditis elegans ProteinsGABA Plasma Membrane Transport ProteinsGlycine Plasma Membrane Transport ProteinsSLC6A5 protein, humanSLC6A9 protein, human

Identifiers

PMID24619162
OpenAlexW2018600661

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.